RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MED8Q96G25 268 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 PAFAH2Q99487 392 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 DPH7Q9BTV6 452 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 ATG10Q9H0Y0 220 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 ANKZF1Q9H8Y5 726 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 SLC6A20Q9NP91 592 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 CCDC177Q9NQR7 707 aaPredicted RBP11.88□□□□□ -0.51
SMAD3-205ENST00000558428 IRAK4Q9NWZ3 460 aa11.88□□□□□ -0.51
SMAD3-205ENST00000558428 UTP6Q9NYH9 597 aaKnown RBP11.88□□□□□ -0.51
SMAD3-205ENST00000558428 EXOC1LA0A1B0GW35 172 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 HMX2A2RU54 273 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 E7EQ34 232 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 HCRTR1O43613 425 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 CPNE3O75131 537 aaKnown RBP11.87□□□□□ -0.51
SMAD3-205ENST00000558428 MT-ND3P03897 115 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 SLC35E2BP0CK96 405 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 CD1DP15813 335 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 GMPRP36959 345 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 SERPINB9P50453 376 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 PRDX1Q06830 199 aaKnown RBP11.87□□□□□ -0.51
SMAD3-205ENST00000558428 NAE1Q13564 534 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 MAP7Q14244 749 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 ZC3H12BQ5HYM0 836 aaKnown RBP11.87□□□□□ -0.51
SMAD3-205ENST00000558428 PRAMEF17Q5VTA0 474 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 PRAMEF13Q5VWM6 474 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 C6orf15Q6UXA7 325 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-205ENST00000558428 TAOK1Q7L7X3 1001 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 TBC1D1Q86TI0 1168 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-205ENST00000558428 VASH2Q86V25 355 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 ESX1Q8N693 406 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 ATL1Q8WXF7 558 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 FBXL8Q96CD0 374 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 CCNL2Q96S94 520 aaPredicted RBP11.87□□□□□ -0.51
SMAD3-205ENST00000558428 EGFL8Q99944 293 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 TXLNGYQ9BZA5 131 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 SLC7A5P2Q9GIP4 190 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 SNX15Q9NRS6 342 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 EURLQ9NYK6 297 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 PLCL2Q9UPR0 1127 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 OARD1Q9Y530 152 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 KLK4Q9Y5K2 254 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 FER1L5A0AVI2 2057 aa11.87□□□□□ -0.51
SMAD3-205ENST00000558428 OR2A25A4D2G3 310 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 NRP2O60462 931 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 CTSVO60911 334 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 OR2B3O76000 313 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 KRT38O76015 456 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 ANXA5P08758 320 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 LTA4HP09960 611 aaKnown RBP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 CCND1P24385 295 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 SERPINB8P50452 374 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 UCNP55089 124 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 ATP6V0D1P61421 351 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 ABATP80404 500 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 CDKL1Q00532 357 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 ABHD18Q0P651 414 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 SRSF6Q13247 344 aaKnown RBP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 SLC29A2Q14542 456 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 TAF1BQ53T94 588 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 CAPN13Q6MZZ7 669 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 ADCK2Q7Z695 626 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 MCATQ8IVS2 390 aaKnown RBP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 DCAKDQ8WVC6 231 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 PYCR2Q96C36 320 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 CLIP3Q96DZ5 547 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 UBXN10Q96LJ8 280 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 PLCD4Q9BRC7 762 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 SPRTNQ9H040 489 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 PCBD2Q9H0N5 130 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 ACTR5Q9H9F9 607 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 ANKMY1Q9P2S6 941 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 ZNF180Q9UJW8 692 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 TLK1Q9UKI8 766 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 ACOT9Q9Y305 439 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 PCDHB3Q9Y5E6 796 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 V9GYY5 206 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 LOC400499M0QZD8 3231 aa11.86□□□□□ -0.51
SMAD3-205ENST00000558428 KMT2BQ9UMN6 2715 aaPredicted RBP11.86□□□□□ -0.51
SMAD3-205ENST00000558428 A0A087X1B8 175 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 IGKV1-8A0A0C4DH67 115 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 A0A0J9YVX5 310 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 LOC101059948A0A1B0GTJ6 334 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 NCF1BA6NI72 391 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-205ENST00000558428 NCF1CA8MVU1 366 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-205ENST00000558428 ZNF749O43361 778 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 ALDOAP04075 364 aaKnown RBP11.85□□□□□ -0.51
SMAD3-205ENST00000558428 C2P06681 752 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 CTSBP07858 339 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 CCNYL3P0C7X3 344 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 NCF1P14598 390 aaPredicted RBP11.85□□□□□ -0.51
SMAD3-205ENST00000558428 CNTFP26441 200 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 TYK2P29597 1187 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 STAT5AP42229 794 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 TMPRSS3P57727 454 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 VSNL1P62760 191 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 DLG1Q12959 904 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 TGFBIQ15582 683 aa11.85□□□□□ -0.51
SMAD3-205ENST00000558428 OR4D1Q15615 310 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms