RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 BCAP29Q9UHQ4 241 aa10.02□□□□□ -0.81
TPM1-212ENST00000558347 PRAMEF33A0A0G2JMD5 474 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 GLYATL1P3A0A0U1RQE8 302 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 PRR19A6NJB7 356 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 GPR89AB7ZAQ6 455 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 C9orf172C9J069 976 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 MATN2O00339 956 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 CASQ2O14958 399 aaPredicted RBP10.01□□□□□ -0.81
TPM1-212ENST00000558347 PFDN6O15212 129 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 KMOO15229 486 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 HDAC3O15379 428 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 ZW10O43264 779 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 PEX1O43933 1283 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 PRAMEF10O60809 474 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 SRP72O76094 671 aaKnown RBP10.01□□□□□ -0.81
TPM1-212ENST00000558347 CDK14O94921 469 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 GPR89BP0CG08 455 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 PIM1P11309 404 aaPredicted RBP10.01□□□□□ -0.81
TPM1-212ENST00000558347 CCL4P13236 92 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 ZNF7P17097 686 aaPredicted RBP10.01□□□□□ -0.81
TPM1-212ENST00000558347 UGT1A6P19224 532 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 NCF2P19878 526 aaPredicted RBP10.01□□□□□ -0.81
TPM1-212ENST00000558347 UGT1A1P22309 533 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 UGT1A4P22310 534 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 UGT1A3P35503 534 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 TTPAP49638 278 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 CLCNKAP51800 687 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 MTTPP55157 894 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 TMPRSS3P57727 454 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 GPLD1P80108 840 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 MPP1Q00013 466 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 SLC25A3Q00325 362 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 TMEM115Q12893 351 aaPredicted RBP10.01□□□□□ -0.81
TPM1-212ENST00000558347 SQSTM1Q13501 440 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 SEMA3AQ14563 771 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 CHRNA6Q15825 494 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 CLPPQ16740 277 aaPredicted RBP10.01□□□□□ -0.81
TPM1-212ENST00000558347 SH2D4BQ5SQS7 431 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 ARHGAP40Q5TG30 622 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 BROXQ5VW32 411 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 LYPLAL1Q5VWZ2 237 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 OR52E8Q6IFG1 317 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 C16orf89Q6UX73 402 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 FAM151BQ6UXP7 276 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 ATG14Q6ZNE5 492 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 GPR155Q7Z3F1 870 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 SNX20Q7Z614 316 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 C11orf96Q7Z7L8 435 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 SLC9B2Q86UD5 537 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 TMEM126BQ8IUX1 230 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 KBTBD2Q8IY47 623 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 FBXW8Q8N3Y1 598 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 ZNF781Q8N8C0 355 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 OR4D9Q8NGE8 314 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 USP7Q93009 1102 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.01□□□□□ -0.81
TPM1-212ENST00000558347 CCDC97Q96F63 343 aaPredicted RBP10.01□□□□□ -0.81
TPM1-212ENST00000558347 SERPINI1Q99574 410 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 GATA5Q9BWX5 397 aaPredicted RBP10.01□□□□□ -0.81
TPM1-212ENST00000558347 OSGEPL1Q9H4B0 414 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 TCF7L2Q9NQB0 619 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 FOXJ2Q9P0K8 574 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 ACSL6Q9UKU0 697 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 VPS9D1Q9Y2B5 631 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 SLC30A1Q9Y6M5 507 aa10.01□□□□□ -0.81
TPM1-212ENST00000558347 A0A087X1B8 175 aa10□□□□□ -0.81
TPM1-212ENST00000558347 KIR2DS5A0A0G2JLQ3 304 aa10□□□□□ -0.81
TPM1-212ENST00000558347 A0A0G2JNG1 304 aa10□□□□□ -0.81
TPM1-212ENST00000558347 KIR2DS3K7RE56 304 aa10□□□□□ -0.81
TPM1-212ENST00000558347 DUX1O43812 170 aa10□□□□□ -0.81
TPM1-212ENST00000558347 AHCYL1O43865 530 aa10□□□□□ -0.81
TPM1-212ENST00000558347 VEGFDO43915 354 aa10□□□□□ -0.81
TPM1-212ENST00000558347 NPHS1O60500 1241 aa10□□□□□ -0.81
TPM1-212ENST00000558347 FESP07332 822 aa10□□□□□ -0.81
TPM1-212ENST00000558347 SLC2A4P14672 509 aa10□□□□□ -0.81
TPM1-212ENST00000558347 ITGALP20701 1170 aa10□□□□□ -0.81
TPM1-212ENST00000558347 PPARGP37231 505 aaPredicted RBP10□□□□□ -0.81
TPM1-212ENST00000558347 RPL14P50914 215 aaKnown RBP10□□□□□ -0.81
TPM1-212ENST00000558347 CTSCP53634 463 aa10□□□□□ -0.81
TPM1-212ENST00000558347 UCNP55089 124 aa10□□□□□ -0.81
TPM1-212ENST00000558347 ADARP55265 1226 aaKnown RBP10□□□□□ -0.81
TPM1-212ENST00000558347 UBE2IP63279 158 aaKnown RBP10□□□□□ -0.81
TPM1-212ENST00000558347 CDC16Q13042 620 aa10□□□□□ -0.81
TPM1-212ENST00000558347 SRSF6Q13247 344 aaKnown RBP10□□□□□ -0.81
TPM1-212ENST00000558347 CUL3Q13618 768 aa10□□□□□ -0.81
TPM1-212ENST00000558347 CCNIQ14094 377 aa10□□□□□ -0.81
TPM1-212ENST00000558347 KIR2DS5Q14953 304 aa10□□□□□ -0.81
TPM1-212ENST00000558347 TGIF1Q15583 401 aa10□□□□□ -0.81
TPM1-212ENST00000558347 TMEM71Q6P5X7 295 aa10□□□□□ -0.81
TPM1-212ENST00000558347 PCSK4Q6UW60 755 aa10□□□□□ -0.81
TPM1-212ENST00000558347 IZUMO2Q6UXV1 221 aa10□□□□□ -0.81
TPM1-212ENST00000558347 NAPRTQ6XQN6 538 aa10□□□□□ -0.81
TPM1-212ENST00000558347 ACAD11Q709F0 780 aa10□□□□□ -0.81
TPM1-212ENST00000558347 RP9Q8TA86 221 aaKnown RBP10□□□□□ -0.81
TPM1-212ENST00000558347 PMEPA1Q969W9 287 aa10□□□□□ -0.81
TPM1-212ENST00000558347 AHCYL2Q96HN2 611 aaKnown RBP10□□□□□ -0.81
TPM1-212ENST00000558347 UBL7Q96S82 380 aaPredicted RBP10□□□□□ -0.81
TPM1-212ENST00000558347 TIMM29Q9BSF4 260 aa10□□□□□ -0.81
TPM1-212ENST00000558347 ZNF385DQ9H6B1 395 aa10□□□□□ -0.81
TPM1-212ENST00000558347 ZNF358Q9NW07 568 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms