RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 ASH1LQ9NR48 2969 aaKnown RBP8.42□□□□□ -1.06
SNRPA1-206ENST00000558059 COL12A1Q99715 3063 aa8.42□□□□□ -1.06
SNRPA1-206ENST00000558059 SETXQ7Z333 2677 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 IGKV1-8A0A0C4DH67 115 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 OR2A25A4D2G3 310 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 FITM1A5D6W6 292 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 ARGFXA6NJG6 315 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 C9J4A7 227 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 E7ENX8 843 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 MKRN2OSH3BPM6 223 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 PYCARD-AS1I3L0S3 204 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 EIF3FO00303 357 aaPredicted RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SRPX2O60687 465 aaPredicted RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 RFPL1O75677 317 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SEC31AO94979 1220 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SLC16A8O95907 504 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 ONECUT2O95948 504 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 NR1D1P20393 614 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 MCM3P25205 808 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SKIV2L2P42285 1042 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 PAFAH1B1P43034 410 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 CARSP49589 748 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 ITGA8P53708 1063 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 PNLIPRP1P54315 467 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 CDKN2DP55273 166 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 FOXL2P58012 376 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 DCDP81605 110 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 TAP2Q03519 686 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 CHAF1BQ13112 559 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 CBLBQ13191 982 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 NKAIN1Q4KMZ8 207 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 LACTB2Q53H82 288 aaPredicted RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 ZC3H12BQ5HYM0 836 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 TCTE1Q5JU00 501 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 HP1BP3Q5SSJ5 553 aaPredicted RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 RBM20Q5T481 1227 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 TEDDM1Q5T9Z0 273 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 MLIPQ5VWP3 458 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 STEAP4Q687X5 459 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 FRMPD2BQ6IN97 320 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 TCTN3Q6NUS6 607 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 MRPL14Q6P1L8 145 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 TRMT10BQ6PF06 316 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SUSD1Q6UWL2 747 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 ATG14Q6ZNE5 492 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 PIWIL4Q7Z3Z4 852 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 GALNT7Q86SF2 657 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 LRRC56Q8IYG6 542 aaPredicted RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 CPNE9Q8IYJ1 553 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 PDIK1LQ8N165 341 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 C17orf53Q8N3J3 647 aaPredicted RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 ZNF480Q8WV37 535 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SMPDL3AQ92484 453 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 DLG3Q92796 817 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 CERS2Q96G23 380 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 KRT12Q99456 494 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 NDNQ99608 321 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SELENOSQ9BQE4 189 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 DPH7Q9BTV6 452 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 NDC1Q9BTX1 674 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 ACAT2Q9BWD1 397 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 ING2Q9H160 280 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SYNPO2LQ9H987 977 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SLC6A20Q9NP91 592 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 TXLNGQ9NUQ3 528 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 IRAK4Q9NWZ3 460 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 SLC17A6Q9P2U8 582 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 ZC3H7BQ9UGR2 993 aaKnown RBP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 TP53TG5Q9Y2B4 290 aa8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNRPA1-206ENST00000558059 NUP210LQ5VU65 1888 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 RELNP78509 3460 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 LOC105369274A0A096LPK9 316 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 LOC102723532A0A0G2JNH3 316 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 A0A0J9YVX5 310 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 EFCAB8A8MWE9 144 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 DSCR3O14972 297 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 ZBTB14O43829 449 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 VPS26AO75436 327 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 CEACAM4O75871 244 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 MED26O95402 600 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 PDGFAP04085 211 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 ALAS2P22557 587 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 CMPK1P30085 196 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 RPA3P35244 121 aaPredicted RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 HSD17B2P37059 387 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 RPL21P46778 160 aaKnown RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 CCL11P51671 97 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 ARSFP54793 590 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 VSX2P58304 361 aaPredicted RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 MRPS25P82663 173 aaKnown RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 PRDX1Q06830 199 aaKnown RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 FRG1Q14331 258 aaKnown RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 SSPNQ14714 243 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 GRM7Q14831 915 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 SLC9A5Q14940 896 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 HIF1AQ16665 826 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 WASHC2DQ5SRD0 308 aa8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 YOD1Q5VVQ6 348 aaPredicted RBP8.4□□□□□ -1.06
SNRPA1-206ENST00000558059 ZNF425Q6IV72 752 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms