RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 CCDC68Q9H2F9 335 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 SOX17Q9H6I2 414 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 INTS10Q9NVR2 710 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 SYBUQ9NX95 663 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 SOX13Q9UN79 622 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 CRYL1Q9Y2S2 319 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 HS3ST3B1Q9Y662 390 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 SNRNP200O75643 2136 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 SHANK1Q9Y566 2161 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 SPENQ96T58 3664 aaKnown RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 FER1L5A0AVI2 2057 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 A0A0J9YVX5 310 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 VSTM2BA6NLU5 285 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 TXNDC9O14530 226 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 SOCS6O14544 535 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 PCDH17O14917 1159 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 CCNDBP1O95273 360 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 ACPPP15309 386 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 OGNP20774 298 aaKnown RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 CXCR2P25025 360 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 BDKRB1P46663 353 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 KCNJ1P48048 391 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 THOC5Q13769 683 aaKnown RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 TLR1Q15399 786 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 CTSL3PQ5NE16 218 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 KIAA0930Q6ICG6 404 aaPredicted RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 FRMPD2BQ6IN97 320 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 CES3Q6UWW8 571 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 SHISA6Q6ZSJ9 500 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 PARP9Q8IXQ6 854 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 OR11G2Q8NGC1 345 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 STT3BQ8TCJ2 826 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 ZDHHC19Q8WVZ1 309 aaPredicted RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 RERGQ96A58 199 aaPredicted RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 MVB12AQ96EY5 273 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 THOC3Q96J01 351 aaKnown RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 CABS1Q96KC9 395 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 C5orf34Q96MH7 638 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 EBNA1BP2Q99848 306 aaKnown RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 ACAT2Q9BWD1 397 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 MRPS30Q9NP92 439 aaKnown RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 KLHL42Q9P2K6 505 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 CTSFQ9UBX1 484 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 RUVBL2Q9Y230 463 aaKnown RBP13□□□□□ -0.33
SNRPA1-204ENST00000558020 SLC5A6Q9Y289 635 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 PCDHGA10Q9Y5H3 936 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 MAU2Q9Y6X3 613 aa13□□□□□ -0.33
SNRPA1-204ENST00000558020 TEX15Q9BXT5 2789 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 ICE1Q9Y2F5 2266 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 LOC105369274A0A096LPK9 316 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 LOC102723532A0A0G2JNH3 316 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 OR2A25A4D2G3 310 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 CTAGE9A4FU28 777 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 SDR42E2A6NKP2 422 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 GOLGA8KD6RF30 607 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 GOLGA8TH3BQL2 631 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 MAP2K7O14733 419 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 NIPSNAP2O75323 286 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 HPP00738 406 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 ZGLP1P0C6A0 271 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 MLNP12872 115 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 FBLP22087 321 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 ARNTP27540 789 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 PSMB5P28074 263 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 FOXL2P58012 376 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 AP2B1P63010 937 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 RELAQ04206 551 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 KLC1Q07866 573 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 CDC16Q13042 620 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 GPS1Q13098 491 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 TSTA3Q13630 321 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 KLHL38Q2WGJ6 581 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 CCSMST1Q4G0I0 132 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 CRB2Q5IJ48 1285 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 B3GNTL1Q67FW5 361 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 FBXO42Q6P3S6 717 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 IGFL2Q6UWQ7 119 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 ISLR2Q6UXK2 745 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 NEK10Q6ZWH5 1172 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 COX15Q7KZN9 410 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 RNF44Q7L0R7 432 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 CUZD1Q86UP6 607 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 CILP2Q8IUL8 1156 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 KBTBD2Q8IY47 623 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 OR4N4Q8N0Y3 316 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 METTL27Q8N6F8 245 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 BARD1Q99728 777 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 YIPF2Q9BWQ6 316 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 ZBTB20Q9HC78 741 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 XAB2Q9HCS7 855 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 C3orf18Q9UK00 162 aa12.99□□□□□ -0.33
SNRPA1-204ENST00000558020 PCM1Q15154 2024 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 PCSK5Q92824 1860 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 FAM237BA0A1B0GVD1 139 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 A0A1W2PPV9 198 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 WIPF3A6NGB9 483 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 H0YGG7 62 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 MYO1CO00159 1063 aa12.98□□□□□ -0.33
SNRPA1-204ENST00000558020 MASP2O00187 686 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms