RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 OR9A1PQ8NGU1 263 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 SMPDL3AQ92484 453 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 ZNF669Q96BR6 464 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 SNRNP40Q96DI7 357 aaKnown RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 ZFYVE21Q9BQ24 234 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 DPH7Q9BTV6 452 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 CRB3Q9BUF7 120 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 MRPS30Q9NP92 439 aaKnown RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 SEMA3GQ9NS98 782 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 ZC3H7BQ9UGR2 993 aaKnown RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 HS3ST3B1Q9Y662 390 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 PRRC2CQ9Y520 2896 aaKnown RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 SHANK1Q9Y566 2161 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 LOC105369274A0A096LPK9 316 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 LOC102723532A0A0G2JNH3 316 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 OR2A25A4D2G3 310 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 CTAGE9A4FU28 777 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 ZNF839A8K0R7 811 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 NRP2O60462 931 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 PHF2O75151 1096 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 SEMA7AO75326 666 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 VPS26AO75436 327 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 USP1O94782 785 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 CCNDBP1O95273 360 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 KRT14P02533 472 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 FBLP22087 321 aaKnown RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 MAGEA6P43360 314 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 CARSP49589 748 aaKnown RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 THOC5Q13769 683 aaKnown RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 DHX34Q14147 1143 aaKnown RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 FASTKQ14296 549 aaKnown RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 ESPL1Q14674 2120 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 NR6A1Q15406 480 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 KLHL38Q2WGJ6 581 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 ACSBG2Q5FVE4 666 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 AGAP7PQ5VUJ5 663 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 ANKRD22Q5VYY1 191 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 PRMT9Q6P2P2 845 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 KIRREL2Q6UWL6 708 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 CENPUQ71F23 418 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 LRRC8AQ8IWT6 810 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 PRSS58Q8IYP2 241 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 OR4N4Q8N0Y3 316 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 CISD2Q8N5K1 135 aaKnown RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 PRR7Q8TB68 274 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 C19orf60Q96EN9 201 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 CABS1Q96KC9 395 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 AGAP4Q96P64 663 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 WDR77Q9BQA1 342 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 CCDC68Q9H2F9 335 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 XAB2Q9HCS7 855 aaKnown RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 ZNF304Q9HCX3 659 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 ASF1BQ9NVP2 202 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 INTS10Q9NVR2 710 aaKnown RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 CUEDC1Q9NWM3 386 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 ZNF282Q9UDV7 671 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-235ENST00000557740 PPP2R2CQ9Y2T4 447 aa13.98□□□□□ -0.17
SHMT2-235ENST00000557740 FAM237BA0A1B0GVD1 139 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 MYO1CO00159 1063 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 PSIP1O75475 530 aaKnown RBP13.97□□□□□ -0.17
SHMT2-235ENST00000557740 ERGP11308 486 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 MLNP12872 115 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 ACPPP15309 386 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 HSD17B2P37059 387 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 ARHGAP19Q14CB8 494 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 EIF2S3LQ2VIR3 472 aaKnown RBP13.97□□□□□ -0.17
SHMT2-235ENST00000557740 SUSD1Q6UWL2 747 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 CAND1Q86VP6 1230 aaKnown RBP13.97□□□□□ -0.17
SHMT2-235ENST00000557740 PARP9Q8IXQ6 854 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 DTWD1Q8N5C7 304 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 MAGOHBQ96A72 148 aaKnown RBP13.97□□□□□ -0.17
SHMT2-235ENST00000557740 MIEF2Q96C03 454 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 C10orf90Q96M02 699 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 PLCD4Q9BRC7 762 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 TRIM56Q9BRZ2 755 aaKnown RBP13.97□□□□□ -0.17
SHMT2-235ENST00000557740 EPS8L2Q9H6S3 715 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 UTP6Q9NYH9 597 aaKnown RBP13.97□□□□□ -0.17
SHMT2-235ENST00000557740 GALPQ9UBC7 116 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 PLEKHB1Q9UF11 243 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-235ENST00000557740 TAC3Q9UHF0 121 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 PCDHGA10Q9Y5H3 936 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 ICE1Q9Y2F5 2266 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 NOTCH2Q04721 2471 aa13.97□□□□□ -0.17
SHMT2-235ENST00000557740 MAGEB16A2A368 324 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 SDR42E2A6NKP2 422 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 VSTM2BA6NLU5 285 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 H0YGG7 62 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 GOLGA8MH3BSY2 632 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 MAP2K7O14733 419 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 PRPF4O43172 522 aaKnown RBP eCLIP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 MED26O95402 600 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 SYF2O95926 243 aaKnown RBP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 GLRBP48167 497 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 PNLIPRP1P54315 467 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 ARF3P61204 181 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 CCZ1BP86790 482 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 CCZ1P86791 482 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 KLC1Q07866 573 aa13.96□□□□□ -0.17
SHMT2-235ENST00000557740 ELOAQ14241 798 aaKnown RBP13.96□□□□□ -0.17
SHMT2-235ENST00000557740 HIF1AQ16665 826 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms