RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FOXM1Q08050 763 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 CYP4F3Q08477 520 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 NAE1Q13564 534 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 BMPR2Q13873 1038 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 PRAMEF13Q5VWM6 474 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 TLDC1Q6P9B6 456 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 C17orf64Q86WR6 236 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 GPR135Q8IZ08 494 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 CENPLQ8N0S6 344 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-234ENST00000557703 DNAJC22Q8N4W6 341 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 TBC1D19Q8N5T2 526 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 ZNF248Q8NDW4 579 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 ABHD11Q8NFV4 315 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 USP7Q93009 1102 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 RHBDF1Q96CC6 855 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 ZNF501Q96CX3 271 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-234ENST00000557703 LRFN5Q96NI6 719 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 OR6C1Q96RD1 312 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 EGFL8Q99944 293 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 MRPL57Q9BQC6 102 aaKnown RBP13.17□□□□□ -0.3
SHMT2-234ENST00000557703 PLCD4Q9BRC7 762 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 SARGQ9BW04 601 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 GPRC5BQ9NZH0 403 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 NUDT4Q9NZJ9 180 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.17□□□□□ -0.3
SHMT2-234ENST00000557703 DCDC2Q9UHG0 476 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 TSR3Q9UJK0 312 aaKnown RBP13.17□□□□□ -0.3
SHMT2-234ENST00000557703 PLCL2Q9UPR0 1127 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 TMEM184BQ9Y519 407 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-234ENST00000557703 TNPO3Q9Y5L0 923 aaKnown RBP13.17□□□□□ -0.3
SHMT2-234ENST00000557703 V9GYY5 206 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-234ENST00000557703 AKAP13Q12802 2813 aa13.17□□□□□ -0.3
SHMT2-234ENST00000557703 KCNE1BA0A087WTH5 132 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 NPEPPSL1A6NEC2 478 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 RFPL1O75677 317 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 GUCA1CO95843 209 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 NPPBP16860 134 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 ITIH1P19827 911 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 MAGP20916 626 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 CXCR2P25025 360 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 GRK3P35626 688 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 CCT5P48643 541 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 MAPK10P53779 464 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 EMP3P54852 163 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 ITGA1P56199 1179 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 NAA20P61599 178 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 TBPL1P62380 186 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 FASTKQ14296 549 aaKnown RBP13.16□□□□□ -0.3
SHMT2-234ENST00000557703 MANEAQ5SRI9 462 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
SHMT2-234ENST00000557703 ZNF425Q6IV72 752 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 FOXR1Q6PIV2 292 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 SUSD1Q6UWL2 747 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 PTERQ96BW5 349 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 NXNL1Q96CM4 212 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 SEC16BQ96JE7 1060 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 ATOH8Q96SQ7 321 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 DPH2Q9BQC3 489 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-234ENST00000557703 DPH7Q9BTV6 452 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 EFHD1Q9BUP0 239 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 SPRY4Q9C004 299 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 VPS11Q9H270 941 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 EURLQ9NYK6 297 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 CD274Q9NZQ7 290 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 SENP1Q9P0U3 644 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 TAC3Q9UHF0 121 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 PTBP2Q9UKA9 531 aaKnown RBP13.16□□□□□ -0.3
SHMT2-234ENST00000557703 SRPK3Q9UPE1 567 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 B3GALT1Q9Y5Z6 326 aa13.16□□□□□ -0.3
SHMT2-234ENST00000557703 SNRNP200O75643 2136 aaKnown RBP13.15□□□□□ -0.3
SHMT2-234ENST00000557703 FREM2Q5SZK8 3169 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 C9orf172C9J069 976 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 MAP2K7O14733 419 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 RRP8O43159 456 aaKnown RBP13.15□□□□□ -0.3
SHMT2-234ENST00000557703 CTIFO43310 598 aaKnown RBP13.15□□□□□ -0.3
SHMT2-234ENST00000557703 KLK8O60259 260 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 STK16O75716 305 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 CD63P08962 238 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 FOLR1P15328 257 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 GNAZP19086 355 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 GSTM2P28161 218 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 SLC6A12P48065 614 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 PIK3CGP48736 1102 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 PGGT1BP53609 377 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 ARSFP54793 590 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 ALDH18A1P54886 795 aaKnown RBP13.15□□□□□ -0.3
SHMT2-234ENST00000557703 RPS15AP62244 130 aaKnown RBP13.15□□□□□ -0.3
SHMT2-234ENST00000557703 PCDH1Q08174 1060 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 FAM214AQ32MH5 1076 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 PTCHD3Q3KNS1 767 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 KIAA1614Q5VZ46 1190 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 CDHR3Q6ZTQ4 885 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 MARCH9Q86YJ5 346 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 HOMEZQ8IX15 550 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 UBTD2Q8WUN7 234 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 KCTD4Q8WVF5 259 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 MED8Q96G25 268 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 ZNF285Q96NJ3 590 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 GPR78Q96P69 363 aa13.15□□□□□ -0.3
SHMT2-234ENST00000557703 ZFYVE21Q9BQ24 234 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms