RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 IL26Q9NPH9 171 aa8.86□□□□□ -0.99
NEDD1-211ENST00000557454 RBM22Q9NW64 420 aaKnown RBP eCLIP8.86□□□□□ -0.99
NEDD1-211ENST00000557454 STOX2Q9P2F5 926 aaPredicted RBP8.86□□□□□ -0.99
NEDD1-211ENST00000557454 TRPC4Q9UBN4 977 aa8.86□□□□□ -0.99
NEDD1-211ENST00000557454 B4GALT7Q9UBV7 327 aa8.86□□□□□ -0.99
NEDD1-211ENST00000557454 CFAP45Q9UL16 551 aa8.86□□□□□ -0.99
NEDD1-211ENST00000557454 ZNF407Q9C0G0 2248 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 FITM1A5D6W6 292 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 IFRD1O00458 451 aaPredicted RBP8.85□□□□□ -0.99
NEDD1-211ENST00000557454 CHRNB2P17787 502 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 MSH3P20585 1137 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 SHMT2P34897 504 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 PRKCIP41743 596 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 NSFP46459 744 aaKnown RBP8.85□□□□□ -0.99
NEDD1-211ENST00000557454 ZNF165P49910 485 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 CDR2Q01850 454 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 TNK1Q13470 666 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 BOP1Q14137 746 aaKnown RBP8.85□□□□□ -0.99
NEDD1-211ENST00000557454 BECN1Q14457 450 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 PPP2R5EQ16537 467 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 TAZQ16635 292 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 FAM214AQ32MH5 1076 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 TCTE1Q5JU00 501 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 PRMT9Q6P2P2 845 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 TMEM205Q6UW68 189 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 NT5DC3Q86UY8 548 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 ZNF227Q86WZ6 799 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 HM13Q8TCT9 377 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 MAML1Q92585 1016 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 LRRC46Q96FV0 321 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 ZNF285Q96NJ3 590 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 TRIB3Q96RU7 358 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 SELENOSQ9BQE4 189 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 XPO4Q9C0E2 1151 aaKnown RBP8.85□□□□□ -0.99
NEDD1-211ENST00000557454 DEFB127Q9H1M4 99 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 OR52A5Q9H2C5 316 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 MAGEE1Q9HCI5 957 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 C14orf105Q9NVL8 296 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 CDC42EP3Q9UKI2 254 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 ZNF281Q9Y2X9 895 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 SPO11Q9Y5K1 396 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 NPFFR2Q9Y5X5 522 aa8.85□□□□□ -0.99
NEDD1-211ENST00000557454 BICDL2A1A5D9 508 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 HYKKA2RU49 373 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 KLHL33A6NCF5 533 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 SERINC4A6NH21 518 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 ISM1B1AKI9 464 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 RNF223E7ERA6 249 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 H3BRJ5 948 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 DDX3XO00571 662 aaKnown RBP eCLIP8.84□□□□□ -0.993e-6■■■□□ 15.8
NEDD1-211ENST00000557454 CD5LO43866 347 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 F13A1P00488 732 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 CALB1P05937 261 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 C8orf89P0DMQ9 161 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 DESP17661 470 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 BMP5P22003 454 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 PDHA2P29803 388 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 SERPINB6P35237 376 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 PTH2RP49190 550 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 VSX2P58304 361 aaPredicted RBP8.84□□□□□ -0.99
NEDD1-211ENST00000557454 CAPRIN1Q14444 709 aaKnown RBP8.84□□□□□ -0.99
NEDD1-211ENST00000557454 FBXL19-AS1Q494R0 122 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 BCL7AQ4VC05 210 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 FIGNQ5HY92 759 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 ATL3Q6DD88 541 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 DPY19L2P1Q6NXN4 242 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 DCUN1D2Q6PH85 259 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 LANCL3Q6ZV70 420 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 RETREG3Q86VR2 466 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 ZNF677Q86XU0 584 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 CREBRFQ8IUR6 639 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 OR5AR1Q8NGP9 310 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 LINC00615Q96LM1 132 aaPredicted RBP8.84□□□□□ -0.99
NEDD1-211ENST00000557454 C10orf90Q96M02 699 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 SMC6Q96SB8 1091 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 PCDHB18PQ96TA0 734 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 GSX2Q9BZM3 304 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 PLAGL1Q9UM63 463 aa8.84□□□□□ -0.99
NEDD1-211ENST00000557454 SNRNP200O75643 2136 aaKnown RBP8.84□□□□□ -0.99
NEDD1-211ENST00000557454 TENM1Q9UKZ4 2725 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 F8VZ95 297 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 SGTAO43765 313 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 PSMA2P25787 234 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 CFPP27918 469 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 MIPP30301 263 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 ARL4AP40617 200 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 ZNF135P52742 658 aaPredicted RBP8.83□□□□□ -1
NEDD1-211ENST00000557454 WASHC2DQ5SRD0 308 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 FAM182AQ5T1J6 154 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 FKBP15Q5T1M5 1219 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 C1orf185Q5T7R7 199 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 RIPPLY2Q5TAB7 128 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 MON1BQ7L1V2 547 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 SULF2Q8IWU5 870 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 SLC5A8Q8N695 610 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 C16orf52Q8NHV5 167 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 CREB3L4Q8TEY5 395 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 TFGQ92734 400 aaPredicted RBP8.83□□□□□ -1
NEDD1-211ENST00000557454 SMARCE1Q969G3 411 aa8.83□□□□□ -1
NEDD1-211ENST00000557454 KIAA1191Q96A73 305 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms