RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 LYPLAL1Q5VWZ2 237 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 ASB11Q8WXH4 323 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 CEP295NLQ96MC4 621 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 MTG2Q9H4K7 406 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 BRD9Q9H8M2 597 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 PRDM8Q9NQV8 689 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 TMEM9Q9P0T7 183 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 SNX6Q9UNH7 406 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 MAN2B2Q9Y2E5 1009 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 FPGTO14772 594 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 HIST1H2AGP0C0S8 130 aaPredicted RBP17.19■□□□□ 0.34
XRCC3-218ENST00000557439 HIST1H2ADP20671 130 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 CLK3P49761 638 aaKnown RBP17.19■□□□□ 0.34
XRCC3-218ENST00000557439 ABRQ12979 859 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 DGCR6Q14129 220 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 NR1D2Q14995 579 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 C22orf39Q6P5X5 142 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 SYT12Q8IV01 421 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 MCOLN3Q8TDD5 553 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 RAB2BQ8WUD1 216 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 NRBF2Q96F24 287 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 REXO5Q96IC2 774 aaKnown RBP17.19■□□□□ 0.34
XRCC3-218ENST00000557439 HIST1H2AHQ96KK5 128 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 HIST1H2AJQ99878 128 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 H2AFJQ9BTM1 129 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 SLC12A9Q9BXP2 914 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 RMND5AQ9H871 391 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 KIAA1522Q9P206 1035 aaPredicted RBP17.19■□□□□ 0.34
XRCC3-218ENST00000557439 SNX5Q9Y5X3 404 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 CLIC1O00299 241 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 ANGPTL1O95841 491 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 OLFM2O95897 454 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 OR56A5P0C7T3 313 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 TGFBR1P36897 503 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 OPRL1P41146 370 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 KIR3DL1P43629 444 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 SLC6A12P48065 614 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 FPGSQ05932 587 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 FOXD4Q12950 439 aaPredicted RBP17.19■□□□□ 0.34
XRCC3-218ENST00000557439 FRG2Q64ET8 278 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 B3GNT8Q7Z7M8 397 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 CBARPQ8N350 705 aaPredicted RBP17.19■□□□□ 0.34
XRCC3-218ENST00000557439 TERB1Q8NA31 727 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 MAL2Q969L2 176 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 MUL1Q969V5 352 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 ERLEC1Q96DZ1 483 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 FRG2BQ96QU4 278 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 RAD21L1Q9H4I0 556 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 RASSF1Q9NS23 344 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 SIRT5Q9NXA8 310 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 LSM7Q9UK45 103 aaKnown RBP17.19■□□□□ 0.34
XRCC3-218ENST00000557439 ZNF451Q9Y4E5 1061 aa17.19■□□□□ 0.34
XRCC3-218ENST00000557439 MICAL3Q7RTP6 2002 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 PFN3P60673 137 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 ABHD18Q0P651 414 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 ITGADQ13349 1161 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 RAB33AQ14088 237 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 MOGQ16653 247 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 SMU1Q2TAY7 513 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 USP45Q70EL2 814 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 ABHD11Q8NFV4 315 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 ELMO1Q92556 727 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 CMTM7Q96FZ5 175 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 RDH12Q96NR8 316 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 ALOXE3Q9BYJ1 711 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 E7EQ34 232 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 PITPNM1O00562 1244 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 WNT9AO14904 365 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 RECQL5O94762 991 aaPredicted RBP17.18■□□□□ 0.34
XRCC3-218ENST00000557439 FKBP9O95302 570 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 ETHE1O95571 254 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 FUCA1P04066 466 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 LAMP1P11279 417 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 CD6P30203 668 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 WNT3P56703 355 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 SNRPD1P62314 119 aaKnown RBP17.18■□□□□ 0.34
XRCC3-218ENST00000557439 GBX1Q14549 363 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 PDE12Q6L8Q7 609 aaKnown RBP17.18■□□□□ 0.34
XRCC3-218ENST00000557439 Q6ZPB1 254 aaPredicted RBP17.18■□□□□ 0.34
XRCC3-218ENST00000557439 FKBP9P1Q75LS8 142 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 LRRC70Q7Z2Q7 622 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 ZNF554Q86TJ5 538 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 CENPSQ8N2Z9 138 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 DDHD1Q8NEL9 900 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 FIBINQ8TAL6 211 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 FAR1Q8WVX9 515 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 SORCS1Q8WY21 1168 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 SH3KBP1Q96B97 665 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 TPD52L3Q96J77 140 aa17.18■□□□□ 0.34
XRCC3-218ENST00000557439 PDP1Q9P0J1 537 aaPredicted RBP17.18■□□□□ 0.34
XRCC3-218ENST00000557439 CLPXO76031 633 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 KCNK5O95279 499 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 NTRK1P04629 796 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 URODP06132 367 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 PRPS2P11908 318 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 COX7A2P14406 83 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 IDUAP35475 653 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 PREPP48147 710 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 SPINT3P49223 89 aa17.17■□□□□ 0.34
XRCC3-218ENST00000557439 DCDC5Q6ZRR9 648 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms