RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 PLEKHA7Q6IQ23 1121 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 IL27RAQ6UWB1 636 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 PRSS57Q6UWY2 283 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 UNQ6126/PRO20091Q6UXV3 157 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 TMTC3Q6ZXV5 915 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 MOB3CQ70IA8 216 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 CACUL1Q86Y37 369 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 NAGSQ8N159 534 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 ZNF114Q8NC26 417 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 ZNF248Q8NDW4 579 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 STKLD1Q8NE28 680 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 EXOC6Q8TAG9 804 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 LMO3Q8TAP4 145 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 KCNE4Q8WWG9 221 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 HTRA1Q92743 480 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 PSMG2Q969U7 264 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 APOPT1Q96IL0 206 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 FEM1CQ96JP0 617 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 BBS4Q96RK4 519 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 RIT2Q99578 217 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 GPR174Q9BXC1 333 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 POLR3FQ9H1D9 316 aaPredicted RBP3.74□□□□□ -1.81
CHD8-212ENST00000557329 OCIAD1Q9NX40 245 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 PDP2Q9P2J9 529 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 KCNG2Q9UJ96 466 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 HSF4Q9ULV5 492 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 A4GNTQ9UNA3 340 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 VDAC3Q9Y277 283 aa3.74□□□□□ -1.81
CHD8-212ENST00000557329 TEP1Q99973 2627 aaKnown RBP3.74□□□□□ -1.81
CHD8-212ENST00000557329 DOPEY2Q9Y3R5 2298 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ZNF638Q14966 1978 aaKnown RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 IGHV1OR15-9A0A0B4J2B8 117 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 TEX13CA0A0J9YWL9 993 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 SMIM28A0A1B0GU29 152 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 TIMM23O14925 209 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 BCAT2O15382 392 aaPredicted RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 ZBTB43O43298 467 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 USO1O60763 962 aaKnown RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 ZNF217O75362 1048 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 PPP1R3DO95685 299 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ACADMP11310 421 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ANOS1P23352 680 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 GNA11P29992 359 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 TUFMP49411 452 aaKnown RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 UCNP55089 124 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 RIPPLY3P57055 190 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ERVFC1-1P60608 527 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 UFM1P61960 85 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 BNC1Q01954 994 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 SPAG1Q07617 926 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 TRAF3Q13114 568 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 SF3B4Q15427 424 aaKnown RBP eCLIP3.73□□□□□ -1.81
CHD8-212ENST00000557329 ZRSR1Q15695 479 aaKnown RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 IGFBP7Q16270 282 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 SYT16Q17RD7 645 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ZNF672Q499Z4 452 aaPredicted RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 SLC39A12Q504Y0 691 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 FAM69BQ5VUD6 431 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 SDHAF4Q5VUM1 108 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 TRNP1Q6NT89 227 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 INO80CQ6PI98 192 aaPredicted RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 SLC22A25Q6T423 547 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 GLRX5Q86SX6 157 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ARMC8Q8IUR7 673 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 DHX40Q8IX18 779 aaKnown RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 DSELQ8IZU8 1212 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 EID2Q8N6I1 236 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 IL17RCQ8NAC3 791 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 LILRB1Q8NHL6 650 aaPredicted RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 NFKBIDQ8NI38 313 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 OLIG1Q8TAK6 271 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ARRDC2Q8TBH0 407 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 TBCKQ8TEA7 893 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 CCDC12Q8WUD4 166 aaPredicted RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 C18orf25Q96B23 403 aaPredicted RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 HVCN1Q96D96 273 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 CNDP2Q96KP4 475 aaKnown RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 HARBI1Q96MB7 349 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 LXNQ9BS40 222 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 CCDC94Q9BW85 323 aaPredicted RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 PDCL3Q9H2J4 239 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 PDZD7Q9H5P4 517 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 RETREG1Q9H6L5 497 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 FKRPQ9H9S5 495 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 RPF1Q9H9Y2 349 aaKnown RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 BRF2Q9HAW0 419 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 MAGEE1Q9HCI5 957 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 POLD4Q9HCU8 107 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 TXLNGQ9NUQ3 528 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 SLC38A7Q9NVC3 462 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 PRMT7Q9NVM4 692 aaPredicted RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 RBM28Q9NW13 759 aaKnown RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 BARHL2Q9NY43 387 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ZNF224Q9NZL3 707 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 DDX25Q9UHL0 483 aaKnown RBP3.73□□□□□ -1.81
CHD8-212ENST00000557329 CDC14AQ9UNH5 594 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 GTF2A1LQ9UNN4 478 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ERVK-11Q9UQG0 969 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 ASB3Q9Y575 518 aa3.73□□□□□ -1.81
CHD8-212ENST00000557329 CEP192Q8TEP8 1941 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms