RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TCTE1Q5JU00 501 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 EXOSC6Q5RKV6 272 aaKnown RBP8.32□□□□□ -1.08
VRK1-206ENST00000557222 AGAP7PQ5VUJ5 663 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 PRAMEF13Q5VWM6 474 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 KCTD11Q693B1 232 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 RPUSD3Q6P087 351 aaKnown RBP8.32□□□□□ -1.08
VRK1-206ENST00000557222 DARS2Q6PI48 645 aaKnown RBP8.32□□□□□ -1.08
VRK1-206ENST00000557222 TAS2R42Q7RTR8 314 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 OVCH1Q7RTY7 1134 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 CUZD1Q86UP6 607 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 ZDHHC13Q8IUH4 622 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 CCDC170Q8IYT3 715 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 CLDN19Q8N6F1 224 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 ZNF655Q8N720 491 aaPredicted RBP8.32□□□□□ -1.08
VRK1-206ENST00000557222 OR5AR1Q8NGP9 310 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 NAT14Q8WUY8 206 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 INPP5DQ92835 1189 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 DNAJC1Q96KC8 554 aaKnown RBP8.32□□□□□ -1.08
VRK1-206ENST00000557222 AGAP4Q96P64 663 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 ALS2CR12Q96Q35 445 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 LMF1Q96S06 567 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 TTC1Q99614 292 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 APOL2Q9BQE5 337 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 HGH1Q9BTY7 390 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 HEMGNQ9BXL5 484 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 OSBPL8Q9BZF1 889 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 KLHL25Q9H0H3 589 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 FAM96AQ9H5X1 160 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 XKR8Q9H6D3 395 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 LRRC40Q9H9A6 602 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 INTS7Q9NVH2 962 aaKnown RBP8.32□□□□□ -1.08
VRK1-206ENST00000557222 EURLQ9NYK6 297 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 RIMKLBQ9ULI2 386 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 ENTPD4Q9Y227 616 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 CDYLQ9Y232 598 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 PCSK5Q92824 1860 aa8.32□□□□□ -1.08
VRK1-206ENST00000557222 A0A1B0GX78 115 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 MROH6A6NGR9 719 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 SOWAHDA6NJG2 315 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 AKR1B15C9JRZ8 316 aaPredicted RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 EIF1AYO14602 144 aaKnown RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 PJA2O43164 708 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 HNRNPRO43390 633 aaKnown RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 EIF4EBP3O60516 100 aaPredicted RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 CNOT3O75175 753 aaKnown RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 TGFB1P01137 390 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 RPN2P04844 631 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 OR56A5P0C7T3 313 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 ITGAXP20702 1163 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 PTMSP20962 102 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 ITGA3P26006 1051 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 CTNNA2P26232 953 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 CTNNA1P35221 906 aaKnown RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 MARCKSL1P49006 195 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 CDKN1CP49918 316 aaPredicted RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 RAB28P51157 221 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 TMPRSS15P98073 1019 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 TBX2Q13207 712 aaPredicted RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 OLIG2Q13516 323 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 ZC3H12BQ5HYM0 836 aaKnown RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 C1orf189Q5VU69 101 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 IRAK1BP1Q5VVH5 260 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 C1QL3Q5VWW1 255 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 TRIM73Q86UV7 250 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 KCNMB4Q86W47 210 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 PIANPQ8IYJ0 282 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 FAR1Q8WVX9 515 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 ELMO1Q92556 727 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 KRT35Q92764 455 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 ZUFSPQ96AP4 578 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 ZNF285Q96NJ3 590 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 LHPPQ9H008 270 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 EPS8L2Q9H6S3 715 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 SEMA3GQ9NS98 782 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 SLC22A11Q9NSA0 550 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 SPHK1Q9NYA1 384 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 SMARCAL1Q9NZC9 954 aa8.31□□□□□ -1.08
VRK1-206ENST00000557222 DHCR7Q9UBM7 475 aaKnown RBP8.31□□□□□ -1.08
VRK1-206ENST00000557222 AKAP9Q99996 3911 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 A0A1B0GUH1 482 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 HEATR9A2RTY3 570 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 FITM1A5D6W6 292 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 ISM1B1AKI9 464 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 TARM1B6A8C7 271 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 SOCS6O14544 535 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 DSCR3O14972 297 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 HCRTR1O43613 425 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 SRPX2O60687 465 aaPredicted RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 STSP08842 583 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 TPBGLP0DKB5 382 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 TNFRSF8P28908 595 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 PKLRP30613 574 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 PPARGP37231 505 aaPredicted RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 CARSP49589 748 aaKnown RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 RWDD2BP57060 319 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 GRM7Q14831 915 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 ZNF169Q14929 603 aaPredicted RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 SPA17Q15506 151 aa8.3□□□□□ -1.08
VRK1-206ENST00000557222 ZRSR2Q15696 482 aaKnown RBP8.3□□□□□ -1.08
VRK1-206ENST00000557222 NKG7Q16617 165 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms