RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 ARHGAP36Q6ZRI8 547 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 COX15Q7KZN9 410 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 LIX1LQ8IVB5 337 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 PRSS58Q8IYP2 241 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 LGI4Q8N135 537 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 BEST3Q8N1M1 668 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 PGBD5Q8N414 524 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 LIX1Q8N485 282 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 RPRMLQ8N4K4 120 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 DNAJC22Q8N4W6 341 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 TTC29Q8NA56 475 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-245ENST00000556958 GPR26Q8NDV2 337 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 CREB3L4Q8TEY5 395 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 SMPDL3BQ92485 455 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 CCDC34Q96HJ3 373 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 VPS35Q96QK1 796 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 SMIM14Q96QK8 99 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 FERD3LQ96RJ6 166 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 CCL19Q99731 98 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 C11orf70Q9BRQ4 267 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 ADGRE3Q9BY15 652 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 HES7Q9BYE0 225 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 BHLHE41Q9C0J9 482 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-245ENST00000556958 POLR1EQ9GZS1 481 aaKnown RBP5.43□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF700Q9H0M5 742 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 ZFYVE1Q9HBF4 777 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF304Q9HCX3 659 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 DTLQ9NZJ0 730 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 Q9UFV3 132 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 CHKBQ9Y259 395 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 EIF3LQ9Y262 564 aaKnown RBP5.43□□□□□ -1.54
ATXN3-245ENST00000556958 CUBNO60494 3623 aa5.43□□□□□ -1.54
ATXN3-245ENST00000556958 LOC102723996A0A087X1L8 192 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ANKRD62A6NC57 917 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 OR14I1A6ND48 311 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 HSPB2A8KAH6 182 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ANKRD66B4E2M5 251 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 NPIPA2E9PIF3 369 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 NPIPA3F8WFD2 350 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 QSOX1O00391 747 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 DVL2O14641 736 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 SLC25A12O75746 678 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 STATHP02808 62 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 CELA2AP08217 269 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 GLI4P10075 376 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ERCC2P18074 760 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 EGR1P18146 543 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 SYT1P21579 422 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 CFPP27918 469 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 CD86P42081 329 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ASCL1P50553 236 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ARSEP51690 589 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF135P52742 658 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 CDH6P55285 790 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 EEF1A2Q05639 463 aaKnown RBP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 DPYSQ14117 519 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 MESDQ14696 234 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ZIC1Q15915 447 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 HSPB2Q16082 182 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 PDCD2Q16342 344 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 TAZQ16635 292 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 LONRF2Q1L5Z9 754 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 FBXL19-AS1Q494R0 122 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 C2CD6Q53TS8 623 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ZC3H12BQ5HYM0 836 aaKnown RBP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 EMC4Q5J8M3 183 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 LDLRAP1Q5SW96 308 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 RIPPLY2Q5TAB7 128 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ACAD10Q6JQN1 1059 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 H3F3CQ6NXT2 135 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ZNF585AQ6P3V2 769 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 FAM83HQ6ZRV2 1179 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 WFDC8Q8IUA0 241 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 LRRC49Q8IUZ0 686 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 SLC5A8Q8N695 610 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 LPCAT1Q8NF37 534 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 RBM41Q96IZ5 413 aaKnown RBP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 IMMP1LQ96LU5 166 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 MESP1Q9BRJ9 268 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 THAP2Q9H0W7 228 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ATG10Q9H0Y0 220 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 CLSTN2Q9H4D0 955 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 PCDH9Q9HC56 1237 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 SPTLC3Q9NUV7 552 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 C14orf105Q9NVL8 296 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 ANKRD10Q9NXR5 420 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 NFKBIL1Q9UBC1 381 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 LPAR3Q9UBY5 353 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 PCDHA7Q9UN72 937 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 KLF13Q9Y2Y9 288 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATXN3-245ENST00000556958 MAU2Q9Y6X3 613 aa5.42□□□□□ -1.54
ATXN3-245ENST00000556958 A0A0J9YY10 115 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 GABRR3A8MPY1 467 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 LINC01387J3KSC0 135 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 IFRD1O00458 451 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-245ENST00000556958 PRPF4O43172 522 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATXN3-245ENST00000556958 HCRTR1O43613 425 aa5.41□□□□□ -1.54
ATXN3-245ENST00000556958 HS6ST1O60243 411 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms