RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 OR2A25A4D2G3 310 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 FITM1A5D6W6 292 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 GFYI3L273 518 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 RFPL1O75677 317 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 KLF7O75840 302 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 MED26O95402 600 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 TTC4O95801 387 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 SLC16A8O95907 504 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 CATP04040 527 aaKnown RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 ENO3P13929 434 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 SKIV2L2P42285 1042 aaKnown RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 ITGA8P53708 1063 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 FOXL2P58012 376 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 FASTKD3Q14CZ7 662 aaKnown RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 TRADDQ15628 312 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 SF1Q15637 639 aaKnown RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 TTLL9Q3SXZ7 439 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 LACTB2Q53H82 288 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 RBM20Q5T481 1227 aaKnown RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 DUPD1Q68J44 220 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 FRMPD2BQ6IN97 320 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 MRPL14Q6P1L8 145 aaKnown RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 WDR93Q6P2C0 686 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 TLDC1Q6P9B6 456 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 TTC23LQ6PF05 361 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 TRMT10BQ6PF06 316 aaKnown RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 COX15Q7KZN9 410 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 CCDC25Q86WR0 208 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 PTRH1Q86Y79 214 aaKnown RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 LRRC56Q8IYG6 542 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 RAB42Q8N4Z0 105 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 MAGEC3Q8TD91 643 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 ZNF480Q8WV37 535 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 ASB11Q8WXH4 323 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 DLG3Q92796 817 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 NDNQ99608 321 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 NAT9Q9BTE0 207 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 DHRS4Q9BTZ2 278 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 TRIM4Q9C037 500 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 SLC7A5P2Q9GIP4 190 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 ZNF71Q9NQZ8 489 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 INTS7Q9NVH2 962 aaKnown RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-224ENST00000556737 WHRNQ9P202 907 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 CHMP2BQ9UQN3 213 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 TEX264Q9Y6I9 313 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 ANKRD12Q6UB98 2062 aa9.9□□□□□ -0.82
SHMT2-224ENST00000556737 TNRC6AQ8NDV7 1962 aaKnown RBP9.9□□□□□ -0.83
SHMT2-224ENST00000556737 A0A1B0GX78 115 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 ARGFXA6NJG6 315 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 TARM1B6A8C7 271 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 C9J4A7 227 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 E7ENX8 843 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 E7ESA3 106 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 EIF3FO00303 357 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-224ENST00000556737 ONECUT2O95948 504 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 AHSGP02765 367 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 UMODP07911 640 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 AGXTP21549 392 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 TNFRSF8P28908 595 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 IMPA1P29218 277 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 ELK3P41970 407 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 PNLIPRP1P54315 467 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 CDKN2DP55273 166 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 CAV1Q03135 178 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 TAP2Q03519 686 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 ATP1A4Q13733 1029 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 SLC9A5Q14940 896 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 ARHGAP19Q14CB8 494 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 HIF1AQ16665 826 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 NKAIN1Q4KMZ8 207 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 ZC3H12BQ5HYM0 836 aaKnown RBP9.89□□□□□ -0.83
SHMT2-224ENST00000556737 HP1BP3Q5SSJ5 553 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-224ENST00000556737 TEDDM1Q5T9Z0 273 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 SUSD1Q6UWL2 747 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 KIAA0408Q6ZU52 694 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 GALNT7Q86SF2 657 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 MRGPREQ86SM8 312 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 PAQR7Q86WK9 346 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 DTWD1Q8N5C7 304 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 PPFIBP2Q8ND30 876 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 INPP5DQ92835 1189 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 ZUFSPQ96AP4 578 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 FMO2Q99518 471 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 NDC1Q9BTX1 674 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 ACAT2Q9BWD1 397 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 EPN3Q9H201 632 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 CCDC68Q9H2F9 335 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 TLK1Q9UKI8 766 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 ADAMTS6Q9UKP5 1117 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 RAB21Q9UL25 225 aa9.89□□□□□ -0.83
SHMT2-224ENST00000556737 HEMK1Q9Y5R4 338 aaPredicted RBP9.89□□□□□ -0.83
SHMT2-224ENST00000556737 MED13Q9UHV7 2174 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 RELNP78509 3460 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 LOC105369274A0A096LPK9 316 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 LOC102723532A0A0G2JNH3 316 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 CCDC151A5D8V7 595 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 MKRN2OSH3BPM6 223 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 SMAPO00193 183 aa9.88□□□□□ -0.83
SHMT2-224ENST00000556737 DSCR3O14972 297 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms