RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 SRMSQ9H3Y6 488 aa9.64□□□□□ -0.87
SCFD1-220ENST00000556486 SUCOQ9UBS9 1254 aaKnown RBP9.64□□□□□ -0.87
SCFD1-220ENST00000556486 CRLS1Q9UJA2 301 aa9.64□□□□□ -0.87
SCFD1-220ENST00000556486 SERTAD3Q9UJW9 196 aa9.64□□□□□ -0.87
SCFD1-220ENST00000556486 PCDHA3Q9Y5H8 950 aa9.64□□□□□ -0.87
SCFD1-220ENST00000556486 PKDREJQ9NTG1 2253 aa9.64□□□□□ -0.87
SCFD1-220ENST00000556486 NIPBLQ6KC79 2804 aaeCLIP9.64□□□□□ -0.87
SCFD1-220ENST00000556486 DOCK10Q96BY6 2186 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 FAM181BA6NEQ2 426 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 C2orf74A8MZ97 194 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 C9J4A7 227 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 H7C0C1 242 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 IFRD1O00458 451 aaPredicted RBP9.63□□□□□ -0.87
SCFD1-220ENST00000556486 ZNF749O43361 778 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 CNOT3O75175 753 aaKnown RBP9.63□□□□□ -0.87
SCFD1-220ENST00000556486 AP2A2O94973 939 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 POLBP06746 335 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 CD63P08962 238 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 CBSLP0DN79 551 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 RBP3P10745 1247 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 COX6B1P14854 86 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 PVRP15151 417 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 ITGA3P26006 1051 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 ACRV1P26436 265 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 PSMB4P28070 264 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 HTR1EP28566 365 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 CBSP35520 551 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 ATP5OP48047 213 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 SOX8P57073 446 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 PPP2R2AP63151 447 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 OTUD4Q01804 1114 aaKnown RBP9.63□□□□□ -0.87
SCFD1-220ENST00000556486 KRT33BQ14525 404 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 PRPSAP1Q14558 356 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 DEFB110Q30KQ9 67 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 KCTD11Q693B1 232 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 RHBDD2Q6NTF9 364 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 IGFL3Q6UXB1 125 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 AMIGO1Q86WK6 493 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 ADGRF3Q8IZF5 1079 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 TC2NQ8N9U0 490 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 OR52E1Q8NGJ3 308 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 DNAJB14Q8TBM8 379 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 ITLN2Q8WWU7 325 aaPredicted RBP9.63□□□□□ -0.87
SCFD1-220ENST00000556486 NACC2Q96BF6 587 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 MAGEB10Q96LZ2 347 aaPredicted RBP9.63□□□□□ -0.87
SCFD1-220ENST00000556486 GBP5Q96PP8 586 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 WDR77Q9BQA1 342 aaPredicted RBP9.63□□□□□ -0.87
SCFD1-220ENST00000556486 HEMGNQ9BXL5 484 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 OSBPL8Q9BZF1 889 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 TRIM8Q9BZR9 551 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 ENAMQ9NRM1 1142 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 INTS7Q9NVH2 962 aaKnown RBP9.63□□□□□ -0.87
SCFD1-220ENST00000556486 P4HTMQ9NXG6 502 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 CDYLQ9Y232 598 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 PADI2Q9Y2J8 665 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 AP1M2Q9Y6Q5 423 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 DNHD1Q96M86 4753 aa9.63□□□□□ -0.87
SCFD1-220ENST00000556486 CCDC66A2RUB6 948 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 GSAPA4D1B5 854 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 BTNL10A8MVZ5 291 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 E7EQ34 232 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 QSOX1O00391 747 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 PEX12O00623 359 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 LIN7AO14910 233 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-220ENST00000556486 RGS13O14921 159 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 IGHEP01854 428 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 TP53P04637 393 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-220ENST00000556486 PDHA2P29803 388 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 FOLR3P41439 243 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 GABRA4P48169 554 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 EIF3EP60228 445 aaKnown RBP9.62□□□□□ -0.87
SCFD1-220ENST00000556486 OLIG2Q13516 323 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 SKOR2Q2VWA4 1001 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-220ENST00000556486 HP1BP3Q5SSJ5 553 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-220ENST00000556486 SPESP1Q6UW49 350 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 PACS1Q6VY07 963 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 CDHR3Q6ZTQ4 885 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 FLVCR1-AS1Q8TAF5 88 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 PROKR1Q8TCW9 393 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 FAR1Q8WVX9 515 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 TM9SF4Q92544 642 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 TFGQ92734 400 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-220ENST00000556486 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.62□□□□□ -0.87
SCFD1-220ENST00000556486 LRRC45Q96CN5 670 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 TBL1YQ9BQ87 522 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 APOL2Q9BQE5 337 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 C10orf88Q9H8K7 445 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 LUC7LQ9NQ29 371 aaKnown RBP9.62□□□□□ -0.87
SCFD1-220ENST00000556486 NLE1Q9NVX2 485 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-220ENST00000556486 OR6C2Q9NZP2 312 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 PCDHA13Q9Y5I0 950 aa9.62□□□□□ -0.87
SCFD1-220ENST00000556486 PCM1Q15154 2024 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 TRGV8A0A0C4DH27 118 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 HEATR9A2RTY3 570 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 MROH6A6NGR9 719 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 C19orf84I3L1E1 186 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 KCNN4O15554 427 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 HCRTR1O43613 425 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 KLHL41O60662 606 aa9.61□□□□□ -0.87
SCFD1-220ENST00000556486 JRKO75564 520 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms