RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 CFAP206Q8IYR0 622 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 ATL1Q8WXF7 558 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 VPS50Q96JG6 964 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 ADGRE2Q9UHX3 823 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 ZNF639Q9UID6 485 aa23.53■■□□□ 1.36
TMEM260-207ENST00000555497 RANBP2P49792 3224 aaKnown RBP23.52■■□□□ 1.36
TMEM260-207ENST00000555497 KIAA1549LQ6ZVL6 1849 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 ELOVL7A1L3X0 281 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 GSTA4O15217 222 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 ERN1O75460 977 aaKnown RBP23.52■■□□□ 1.36
TMEM260-207ENST00000555497 MAPK1P28482 360 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 RAET1GQ6H3X3 334 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 OR4F3Q6IEY1 312 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 CALHM3Q86XJ0 350 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 FAM47BQ8NA70 645 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 ADI1Q9BV57 179 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 EPHX3Q9H6B9 360 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 SPATA6Q9NWH7 488 aaPredicted RBP23.52■■□□□ 1.36
TMEM260-207ENST00000555497 REV3LO60673 3130 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 H3BM21 787 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 CLOCKO15516 846 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 C1orf105O95561 183 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 ETHE1O95571 254 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 RPL10P27635 214 aaKnown RBP23.52■■□□□ 1.36
TMEM260-207ENST00000555497 MERTKQ12866 999 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 CSTF3Q12996 717 aaKnown RBP23.52■■□□□ 1.36
TMEM260-207ENST00000555497 ELAVL3Q14576 367 aaKnown RBP23.52■■□□□ 1.36
TMEM260-207ENST00000555497 BCL7AQ4VC05 210 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 C9orf50Q5SZB4 431 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 GRHL2Q6ISB3 625 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 AADATQ8N5Z0 425 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 OR7A2PQ8NGA2 310 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 FBXO30Q8TB52 745 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 ITCHQ96J02 903 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 MAGEB10Q96LZ2 347 aaPredicted RBP23.52■■□□□ 1.36
TMEM260-207ENST00000555497 SH3GL1Q99961 368 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 GRIP2Q9C0E4 1043 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 VPS29Q9UBQ0 182 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 UTS2RQ9UKP6 389 aa23.52■■□□□ 1.36
TMEM260-207ENST00000555497 COL4A3Q01955 1670 aa23.52■■□□□ 1.35
TMEM260-207ENST00000555497 ACPPP15309 386 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 GPR1P46091 355 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 ELP6Q0PNE2 266 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 NADK2Q4G0N4 442 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 ATG9BQ674R7 924 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 ZNF551Q7Z340 670 aaPredicted RBP23.51■■□□□ 1.35
TMEM260-207ENST00000555497 TRAPPC5Q8IUR0 188 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 ZNF547Q8IVP9 402 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 MICU2Q8IYU8 434 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 PAPOLBQ9NRJ5 636 aaKnown RBP23.51■■□□□ 1.35
TMEM260-207ENST00000555497 ATXN10Q9UBB4 475 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 HCN2Q9UL51 889 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 H3BNH8 94 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 CXCR6O00574 342 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 SH3BGRLO75368 114 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 H6PDO95479 791 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 RAP2AP10114 183 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 FSHRP23945 695 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 UGT8Q16880 541 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 SLC36A3Q495N2 470 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 KRT80Q6KB66 452 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 MMAAQ8IVH4 418 aaKnown RBP23.51■■□□□ 1.35
TMEM260-207ENST00000555497 ZNF480Q8WV37 535 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 CAAP1Q9H8G2 361 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 PNPLA3Q9NST1 481 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 LIMD1Q9UGP4 676 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 ERVK-11Q9UQG0 969 aa23.51■■□□□ 1.35
TMEM260-207ENST00000555497 PCYT1BQ9Y5K3 369 aaPredicted RBP23.51■■□□□ 1.35
TMEM260-207ENST00000555497 H0YIV9 168 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 PAPLNO95428 1278 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 FCARP24071 287 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 SLC14A1Q13336 389 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 FAM98BQ52LJ0 330 aaKnown RBP23.5■■□□□ 1.35
TMEM260-207ENST00000555497 TMEM214Q6NUQ4 689 aaKnown RBP23.5■■□□□ 1.35
TMEM260-207ENST00000555497 GET4Q7L5D6 327 aaPredicted RBP23.5■■□□□ 1.35
TMEM260-207ENST00000555497 MAGEE2Q8TD90 523 aaPredicted RBP23.5■■□□□ 1.35
TMEM260-207ENST00000555497 CSGALNACT1Q8TDX6 532 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 C11orf24Q96F05 449 aaPredicted RBP23.5■■□□□ 1.35
TMEM260-207ENST00000555497 FOPNLQ96NB1 174 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 MTIF3Q9H2K0 278 aaKnown RBP23.5■■□□□ 1.35
TMEM260-207ENST00000555497 EPB41L1Q9H4G0 881 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 RMND5AQ9H871 391 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 SGK2Q9HBY8 427 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 SH2B3Q9UQQ2 575 aa23.5■■□□□ 1.35
TMEM260-207ENST00000555497 MAGEB17A8MXT2 336 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 LZTS3O60299 673 aaPredicted RBP23.49■■□□□ 1.35
TMEM260-207ENST00000555497 GMNNO75496 209 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 PRSS23O95084 383 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 CLIC3O95833 236 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 ZNF23P17027 643 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 PCDH1Q08174 1060 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 MTAPQ13126 283 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 DUSP6Q16828 381 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 TANGO2Q6ICL3 276 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 ZNF765Q7L2R6 523 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 GPR180Q86V85 440 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 SYT12Q8IV01 421 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 FAM9CQ8IZT9 166 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 TERB1Q8NA31 727 aa23.49■■□□□ 1.35
TMEM260-207ENST00000555497 DNAJB8Q8NHS0 232 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms