RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GABPB2Q8TAK5 448 aaPredicted RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 FAM45AQ8TCE6 357 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 SEC14L1Q92503 715 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 ZNF285Q96NJ3 590 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 GBP5Q96PP8 586 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 RAB17Q9H0T7 212 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 SLC22A11Q9NSA0 550 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 CUEDC1Q9NWM3 386 aaPredicted RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 STOX2Q9P2F5 926 aaPredicted RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 DMGDHQ9UI17 866 aaKnown RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 KCND3Q9UK17 655 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 SH2B3Q9UQQ2 575 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
SNX6-203ENST00000555416 PCM1Q15154 2024 aa13.11□□□□□ -0.31
SNX6-203ENST00000555416 ANKRD12Q6UB98 2062 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 A0A0J9YVX5 310 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 FAM95CA0A1B0GW59 222 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 CDC14CA4D256 554 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 TARM1B6A8C7 271 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 TK2O00142 265 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 NDC80O14777 642 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 FKBP9O95302 570 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 KLK3P07288 261 aaPredicted RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 RPA3P35244 121 aaPredicted RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 GMPRP36959 345 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 RGS4P49798 205 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 VSX2P58304 361 aaPredicted RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 IL2P60568 153 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 SNRPNP63162 240 aaKnown RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 PDAP1Q13442 181 aaKnown RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 SLC9A5Q14940 896 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 ICE2Q659A1 982 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 ZNF425Q6IV72 752 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 RHBDD2Q6NTF9 364 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 C8orf74Q6P047 294 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 C3orf62Q6ZUJ4 267 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 RNF44Q7L0R7 432 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 SLC26A11Q86WA9 606 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 PAQR7Q86WK9 346 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 PALM2Q8IXS6 379 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 MMGT1Q8N4V1 131 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 ANKRD49Q8WVL7 239 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 ZUFSPQ96AP4 578 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 VPS39Q96JC1 886 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 PLCD4Q9BRC7 762 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 CAB39LQ9H9S4 337 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 LRRC4CQ9HCJ2 640 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 MRPS30Q9NP92 439 aaKnown RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 INTS7Q9NVH2 962 aaKnown RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 IRAK4Q9NWZ3 460 aa13.1□□□□□ -0.31
SNX6-203ENST00000555416 CORO1CQ9ULV4 474 aaPredicted RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 MTO1Q9Y2Z2 717 aaKnown RBP13.1□□□□□ -0.31
SNX6-203ENST00000555416 HEATR5BQ9P2D3 2071 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 TLN1Q9Y490 2541 aaKnown RBP13.09□□□□□ -0.31
SNX6-203ENST00000555416 FAM159BA6NKW6 160 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 FAM155BO75949 473 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 C8GP07360 202 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 ZNF37AP17032 561 aaPredicted RBP13.09□□□□□ -0.31
SNX6-203ENST00000555416 CMPK1P30085 196 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 MAGEA4P43358 317 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 POLE2P56282 527 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 GUCY2DQ02846 1103 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 PRDX1Q06830 199 aaKnown RBP13.09□□□□□ -0.31
SNX6-203ENST00000555416 EFTUD2Q15029 972 aaKnown RBP eCLIP13.09□□□□□ -0.314e-7■■■□□ 19.2
SNX6-203ENST00000555416 NCF4Q15080 339 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 CRTC2Q53ET0 693 aaPredicted RBP13.09□□□□□ -0.31
SNX6-203ENST00000555416 WASHC2DQ5SRD0 308 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 TLDC1Q6P9B6 456 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 BORAQ6PGQ7 559 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 PLD3Q8IV08 490 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 MYO1HQ8N1T3 1032 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 MCOLN3Q8TDD5 553 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 MED8Q96G25 268 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 GPR87Q9BY21 358 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 NLNQ9BYT8 704 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 UNKQ9C0B0 810 aaKnown RBP13.09□□□□□ -0.31
SNX6-203ENST00000555416 SLC7A5P2Q9GIP4 190 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 ATG10Q9H0Y0 220 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 RHOJQ9H4E5 214 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 PARVBQ9HBI1 364 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 ENAMQ9NRM1 1142 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 CCDC88CQ9P219 2028 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 KCNMB2Q9Y691 235 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 AP1M2Q9Y6Q5 423 aa13.09□□□□□ -0.31
SNX6-203ENST00000555416 H0YGG7 62 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 CDC7O00311 574 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 HAT1O14929 419 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 SLC16A5O15375 505 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 KLF7O75840 302 aaPredicted RBP13.08□□□□□ -0.32
SNX6-203ENST00000555416 WISP3O95389 354 aaPredicted RBP13.08□□□□□ -0.32
SNX6-203ENST00000555416 STATHP02808 62 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 RAB40ALP0C0E4 278 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 HSD17B2P37059 387 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 ARF3P61204 181 aaPredicted RBP13.08□□□□□ -0.32
SNX6-203ENST00000555416 TBPL1P62380 186 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 RPS15P62841 145 aaKnown RBP13.08□□□□□ -0.32
SNX6-203ENST00000555416 MC1RQ01726 317 aa13.08□□□□□ -0.32
SNX6-203ENST00000555416 CAV1Q03135 178 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms