RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PAMR1Q6UXH9 720 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 SCAMP5Q8TAC9 235 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 MCCC1Q96RQ3 725 aaPredicted RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 DCLRE1CQ96SD1 692 aaKnown RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CHCHD6Q9BRQ6 235 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 BBS2Q9BXC9 721 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CATSPERBQ9H7T0 1116 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 CCSER2Q9H7U1 834 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 EVA1BQ9NVM1 165 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 AIG1Q9NVV5 245 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 MIOSQ9NXC5 875 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 MPP6Q9NZW5 540 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 ELF5Q9UKW6 265 aaPredicted RBP15.25■□□□□ 0.03
SYNE3-203ENST00000554873 BTRCQ9Y297 605 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 V9GYH0 126 aa15.25■□□□□ 0.03
SYNE3-203ENST00000554873 TLL1O43897 1013 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 S1PR4O95977 384 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 F2P00734 622 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 CD72P21854 359 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 CPN2P22792 545 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 CHMP24386 653 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 HOXC13P31276 330 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 ARSDP51689 593 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 QPRTQ15274 297 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 PROX2Q3B8N5 592 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 MANEALQ5VSG8 457 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 KANK2Q63ZY3 851 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 OR52K2Q8NGK3 314 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 OR6P1Q8NGX9 317 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 TUBB1Q9H4B7 451 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 SERHL2Q9H4I8 314 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 ARNT2Q9HBZ2 717 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 SMURF1Q9HCE7 757 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 ADARB2Q9NS39 739 aaKnown RBP15.24■□□□□ 0.03
SYNE3-203ENST00000554873 MAN2B2Q9Y2E5 1009 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 LRRC14BA6NHZ5 514 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 NT5C1B-RDH14C9J2C7 533 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 GSTA4O15217 222 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 RGS5O15539 181 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 IRAK2O43187 625 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 SEC22BO75396 215 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 LINC00032P0C843 101 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 PGFP49763 221 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 FOXA1P55317 472 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 MTPNP58546 118 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 UFM1P61960 85 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 HERVK_113P63132 956 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 CSNK2BP67870 215 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 ELP6Q0PNE2 266 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 FBXO43Q4G163 708 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 TSPYL5Q86VY4 417 aaPredicted RBP15.24■□□□□ 0.03
SYNE3-203ENST00000554873 CYP4Z1Q86W10 505 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 EXT2Q93063 718 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 RHBDF1Q96CC6 855 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 PPP1R2P1Q96PQ5 205 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 RTP3Q9BQQ7 232 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 ERVK-6Q9BXR3 956 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 SPNS1Q9H2V7 528 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 ABHD16BQ9H3Z7 469 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 MID1IP1Q9NPA3 183 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 MARCH4Q9P2E8 410 aaPredicted RBP15.24■□□□□ 0.03
SYNE3-203ENST00000554873 ADGRE2Q9UHX3 823 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 SNX8Q9Y5X2 465 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 U3KQV3 271 aa15.24■□□□□ 0.03
SYNE3-203ENST00000554873 CIB4A0PJX0 185 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 GRXCR2A6NFK2 248 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 OR51F1A6NGY5 319 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 FGF10O15520 208 aaPredicted RBP15.23■□□□□ 0.03
SYNE3-203ENST00000554873 SIX3O95343 332 aaPredicted RBP15.23■□□□□ 0.03
SYNE3-203ENST00000554873 DAB2P98082 770 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 IHHQ14623 411 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 AANATQ16613 207 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 ZMAT1Q5H9K5 638 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 DGLUCYQ7Z3D6 616 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 OR8H3Q8N146 312 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 DPP10Q8N608 796 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 FBXW5Q969U6 566 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 PAAF1Q9BRP4 392 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 TINF2Q9BSI4 451 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 COPS4Q9BT78 406 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 SRRQ9GZT4 340 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 SLC25A51Q9H1U9 297 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 CRYL1Q9Y2S2 319 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 NYNRINQ9P2P1 1898 aaKnown RBP15.23■□□□□ 0.03
SYNE3-203ENST00000554873 A0A1W2PRG6 482 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 TSC22D2O75157 780 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 PDE9AO76083 593 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 CRYBB1P53674 252 aaPredicted RBP15.23■□□□□ 0.03
SYNE3-203ENST00000554873 PER3P56645 1201 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 MAXP61244 160 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 UBE3AQ05086 875 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 ANGPT1Q15389 498 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 PRAMEF19Q5SWL8 479 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 AFMIDQ63HM1 303 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 NLRP8Q86W28 1048 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 TMC8Q8IU68 726 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 GPALPP1Q8IXQ4 340 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 ZBTB44Q8NCP5 570 aa15.23■□□□□ 0.03
SYNE3-203ENST00000554873 VANGL1Q8TAA9 524 aaPredicted RBP15.23■□□□□ 0.03
SYNE3-203ENST00000554873 KLHL6Q8WZ60 621 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms