RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 CCDC149Q6ZUS6 474 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 AKAP14Q86UN6 197 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 PHACTR4Q8IZ21 702 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 OR13F1Q8NGS4 319 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 AP2M1Q96CW1 435 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 TRIB3Q96RU7 358 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 ZNF385DQ9H6B1 395 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 MOV10Q9HCE1 1003 aaKnown RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 PRDM5Q9NQX1 630 aaPredicted RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 TRMT13Q9NUP7 481 aaKnown RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 EXD2Q9NVH0 621 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 STMN3Q9NZ72 180 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 KLHL42Q9P2K6 505 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 ASF1AQ9Y294 204 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 WBP11Q9Y2W2 641 aaKnown RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 PCDHA9Q9Y5H5 950 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 PIKFYVEQ9Y2I7 2098 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 FAM240BA0A1B0GVZ2 78 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 HHLA1C9JL84 531 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 UBFD1O14562 309 aaKnown RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 B4GAT1O43505 415 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 CA12O43570 354 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 DIRAS1O95057 198 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 MT-ND2P03891 347 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 TSPAN19P0C672 248 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 FMO3P31513 532 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 PPM1AP35813 382 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 IL12RB1P42701 662 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 KCNC4Q03721 635 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 NPRL3Q12980 569 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 HEPACAMQ14CZ8 416 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 PROX2Q3B8N5 592 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 DCDC5Q6ZRR9 648 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 CYP2U1Q7Z449 544 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 NPAS4Q8IUM7 802 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 LGI4Q8N135 537 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 CYP4Z2PQ8N1L4 340 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 TMEM151AQ8N4L1 468 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 ARL14EPQ8N8R7 260 aaPredicted RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 OR10G2Q8NGC3 310 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 OR52J3Q8NH60 311 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 CAPSLQ8WWF8 208 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 RASSF5Q8WWW0 418 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 C1GALT1C1Q96EU7 318 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 CMTM7Q96FZ5 175 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 ZNF514Q96K75 400 aaPredicted RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 GPR62Q9BZJ7 368 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 POLR2J2Q9GZM3 115 aaKnown RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 TRIT1Q9H3H1 467 aaKnown RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 ZDHHC6Q9H6R6 413 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 MAGIXQ9H6Y5 334 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 GPN2Q9H9Y4 310 aaPredicted RBP3.8□□□□□ -1.8
KTN1-217ENST00000554831 SGK2Q9HBY8 427 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.8□□□□□ -1.8
KTN1-217ENST00000554831 SLAMF8Q9P0V8 285 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 SEC14L3Q9UDX4 400 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 CDH7Q9ULB5 785 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 B3GNT3Q9Y2A9 372 aa3.8□□□□□ -1.8
KTN1-217ENST00000554831 TRAV19A0A0A6YYK7 116 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 SYNDIG1LA6NDD5 238 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 ZNF840PA6NDX5 716 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 BOLA2-SMG1P6H3BVE0 249 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 IDH3BO43837 385 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 ALPIP09923 528 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 NR2F1P10589 423 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 RPL17P18621 184 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 EPORP19235 508 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 POLR2EP19388 210 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 DCKP27707 260 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 MANFP55145 182 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 COPZ1P61923 177 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 RPP38P78345 283 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 CREB5Q02930 508 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 ABRAXAS2Q15018 415 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 MED27Q6P2C8 311 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 TMPRSS11BQ86T26 416 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 C17orf64Q86WR6 236 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 NAT16Q8N8M0 369 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 OR10Q1Q8NGQ4 319 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 METTL2AQ96IZ6 378 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 ZNF641Q96N77 438 aaPredicted RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 BBS4Q96RK4 519 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 ACAT2Q9BWD1 397 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 NPLQ9BXD5 320 aaPredicted RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 RBM38Q9H0Z9 239 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 POLR2J3Q9H1A7 115 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 TUBB1Q9H4B7 451 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 TMEM165Q9HC07 324 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 CPNE5Q9HCH3 593 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 DCAF13Q9NV06 445 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 GMPR2Q9P2T1 348 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 ADAM30Q9UKF2 790 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 ATAD5Q96QE3 1844 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 ZDBF2Q9HCK1 2354 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 IGLV3-10A0A075B6K4 115 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 A0A1B0GTW7 788 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 H7C0S8 307 aa3.79□□□□□ -1.8
KTN1-217ENST00000554831 TFECO14948 347 aaPredicted RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 MRPS14O60783 128 aaKnown RBP3.79□□□□□ -1.8
KTN1-217ENST00000554831 ATG13O75143 517 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms