RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 NCEH1Q6PIU2 408 aa11.54□□□□□ -0.56
XRCC3-208ENST00000554811 BBS7Q8IWZ6 715 aa11.54□□□□□ -0.56
XRCC3-208ENST00000554811 UBE2J2Q8N2K1 259 aa11.54□□□□□ -0.56
XRCC3-208ENST00000554811 LILRA3Q8N6C8 439 aaPredicted RBP11.54□□□□□ -0.56
XRCC3-208ENST00000554811 TERB1Q8NA31 727 aa11.54□□□□□ -0.56
XRCC3-208ENST00000554811 NELL1Q92832 810 aa11.54□□□□□ -0.56
XRCC3-208ENST00000554811 FAM210AQ96ND0 272 aa11.54□□□□□ -0.56
XRCC3-208ENST00000554811 MARCH5Q9NX47 278 aa11.54□□□□□ -0.56
XRCC3-208ENST00000554811 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
XRCC3-208ENST00000554811 A0A096LPI6 279 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 PRR23AA6NEV1 266 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 FABP3P05413 133 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 C21orf33P30042 268 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 CHI3L1P36222 383 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 RELAQ04206 551 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 ACVR1Q04771 509 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 RING1Q06587 406 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 OR2T5Q6IEZ7 315 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 CXorf57Q6NSI4 855 aaKnown RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 DSG4Q86SJ6 1040 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 LSRQ86X29 649 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 LEMD2Q8NC56 503 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 OR2T29Q8NH02 315 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 CD99L2Q8TCZ2 262 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 OTULINQ96BN8 352 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 OTUB1Q96FW1 271 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 TSEN34Q9BSV6 310 aaKnown RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 WRAP53Q9BUR4 548 aaKnown RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 USE1Q9NZ43 259 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 FNIP2Q9P278 1114 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 MBD1Q9UIS9 605 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 RAB23Q9ULC3 237 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 DUSP12Q9UNI6 340 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 A0A0G2JN53 185 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 PRSS23O95084 383 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 MAGEA11P43364 429 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 BDKRB1P46663 353 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 PHC1P78364 1004 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 CDK5R2Q13319 367 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 CERS6Q6ZMG9 384 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 ADCK2Q7Z695 626 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 SLC22A16Q86VW1 577 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 HIPK1Q86Z02 1210 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 NLGN4XQ8N0W4 816 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 C1orf52Q8N6N3 182 aaKnown RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 ZNF420Q8TAQ5 688 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 CYB5D2Q8WUJ1 264 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 LZICQ8WZA0 190 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 MRPS31Q92665 395 aaKnown RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 MBOAT4Q96T53 435 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 TCF25Q9BQ70 676 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 OSBPL10Q9BXB5 764 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 SGK2Q9HBY8 427 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 MYO16Q9Y6X6 1858 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 TDRD15B5MCY1 1934 aaKnown RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 MAGEB17A8MXT2 336 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 DNTTP04053 509 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 RRM2P31350 389 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 VLDLRP98155 873 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 ZNF697Q5TEC3 545 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 Q6ZVL8 140 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 PTRH1Q86Y79 214 aaKnown RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 OR8H2Q8N162 312 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 HJURPQ8NCD3 748 aaPredicted RBP11.53□□□□□ -0.56
XRCC3-208ENST00000554811 TANKQ92844 425 aa11.53□□□□□ -0.56
XRCC3-208ENST00000554811 H0YAE9 185 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 AOC2O75106 756 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 ANXA4P09525 319 aaPredicted RBP11.52□□□□□ -0.56
XRCC3-208ENST00000554811 LAMP1P11279 417 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 ACPPP15309 386 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 SDC1P18827 310 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 PTNP21246 168 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 CCR7P32248 378 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 ZFP36L2P47974 494 aaKnown RBP11.52□□□□□ -0.56
XRCC3-208ENST00000554811 EPHB3P54753 998 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 SCML4Q8N228 414 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 NXPE1Q8N323 547 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 SETD9Q8NE22 299 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 RNF167Q9H6Y7 350 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 HEBP1Q9NRV9 189 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 PAK1IP1Q9NWT1 392 aaPredicted RBP11.52□□□□□ -0.56
XRCC3-208ENST00000554811 THUMPD1Q9NXG2 353 aaKnown RBP11.52□□□□□ -0.56
XRCC3-208ENST00000554811 TAS2R16Q9NYV7 291 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 FAM32AQ9Y421 112 aaKnown RBP11.52□□□□□ -0.56
XRCC3-208ENST00000554811 PRKAB1Q9Y478 270 aa11.52□□□□□ -0.56
XRCC3-208ENST00000554811 GREB1Q4ZG55 1949 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 KPNA3O00505 521 aaPredicted RBP11.52□□□□□ -0.57
XRCC3-208ENST00000554811 WISP3O95389 354 aaPredicted RBP11.52□□□□□ -0.57
XRCC3-208ENST00000554811 TGFB1P01137 390 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 EPORP19235 508 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 PTGER1P34995 402 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 HPCAL1P37235 193 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 FKBP1BP68106 108 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 ELAVL2Q12926 359 aaKnown RBP11.52□□□□□ -0.57
XRCC3-208ENST00000554811 ZNF846Q147U1 533 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 TRIM60Q495X7 471 aa11.52□□□□□ -0.57
XRCC3-208ENST00000554811 RBM48Q5RL73 367 aaKnown RBP11.52□□□□□ -0.57
XRCC3-208ENST00000554811 TRMT11Q7Z4G4 463 aaKnown RBP11.52□□□□□ -0.57
XRCC3-208ENST00000554811 TRAPPC5Q8IUR0 188 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms