RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CIB1Q99828 191 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 SH3GL1Q99961 368 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 KCTD14Q9BQ13 255 aaPredicted RBP10.84□□□□□ -0.67
SRP54-205ENST00000554803 FAM117AQ9C073 453 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 PCDHAC1Q9H158 963 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 ALG2Q9H553 416 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 CYP4F12Q9HCS2 524 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 MID1IP1Q9NPA3 183 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 NT5MQ9NPB1 228 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 NLE1Q9NVX2 485 aaPredicted RBP10.84□□□□□ -0.67
SRP54-205ENST00000554803 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.84□□□□□ -0.67
SRP54-205ENST00000554803 POLG2Q9UHN1 485 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 ITGB1BP2Q9UKP3 347 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 PACSIN3Q9UKS6 424 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 B3GNT3Q9Y2A9 372 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.84□□□□□ -0.67
SRP54-205ENST00000554803 GPR45Q9Y5Y3 372 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 SLC30A1Q9Y6M5 507 aa10.84□□□□□ -0.67
SRP54-205ENST00000554803 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 A0A1B0GVM2 712 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 NEMP2A6NFY4 417 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ZNF839A8K0R7 811 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 NEDD8-MDP1E9PL57 170 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 H3BSA7 217 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 FXYD1O00168 92 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 UBFD1O14562 309 aaKnown RBP10.83□□□□□ -0.68
SRP54-205ENST00000554803 PIP5K1BO14986 540 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 SNX2O60749 519 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 RAMP2O60895 175 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 VPS26AO75436 327 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 CLDN11O75508 207 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 SLC22A3O75751 556 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 PRSS23O95084 383 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 CPNE6O95741 557 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ALDOCP09972 364 aaKnown RBP10.83□□□□□ -0.68
SRP54-205ENST00000554803 CISD3P0C7P0 127 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 IMPDH2P12268 514 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 CDH1P12830 882 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 IL1RNP18510 177 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ATP6V1B2P21281 511 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 OR1E1P30953 314 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 CD86P42081 329 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 DGKGP49619 791 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 TTPAP49638 278 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 HNRNPFP52597 415 aaKnown RBP10.83□□□□□ -0.68
SRP54-205ENST00000554803 CDKN2DP55273 166 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 GABARAPL2P60520 117 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 CLCQ05315 142 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 SFSWAPQ12872 951 aaKnown RBP10.83□□□□□ -0.68
SRP54-205ENST00000554803 RALGDSQ12967 914 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 PRKG2Q13237 762 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ILKQ13418 452 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ENPP2Q13822 863 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ZNF235Q14590 738 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 KIF26BQ2KJY2 2108 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 RFX4Q33E94 735 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ZNF829Q3KNS6 432 aaPredicted RBP10.83□□□□□ -0.68
SRP54-205ENST00000554803 MPPE1Q53F39 396 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 TTC23Q5W5X9 447 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 CYHR1Q6ZMK1 362 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 USP51Q70EK9 711 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 CHST9Q7L1S5 443 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 GATAD2AQ86YP4 633 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 HID1Q8IV36 788 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ZNF786Q8N393 782 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 SVOPLQ8N434 492 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 SFRP1Q8N474 314 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 DCBLD1Q8N8Z6 715 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 OR7D4Q8NG98 312 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 OR8J3Q8NGG0 315 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ARRDC2Q8TBH0 407 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 TMEM125Q96AQ2 219 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 SDCCAG3Q96C92 435 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 ISOC1Q96CN7 298 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 TUBGCP3Q96CW5 907 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 PDLIM5Q96HC4 596 aaKnown RBP10.83□□□□□ -0.68
SRP54-205ENST00000554803 ZNF382Q96SR6 550 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 C1orf50Q9BV19 199 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 MAGEH1Q9H213 219 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 C6orf106Q9H6K1 298 aaPredicted RBP10.83□□□□□ -0.68
SRP54-205ENST00000554803 MAP10Q9P2G4 905 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 FBXO10Q9UK96 956 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 RNF112Q9ULX5 631 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 CLCA2Q9UQC9 943 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 SSUH2Q9Y2M2 353 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 SLC27A6Q9Y2P4 619 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 PCDHB3Q9Y5E6 796 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 OAS3Q9Y6K5 1087 aaKnown RBP10.83□□□□□ -0.68
SRP54-205ENST00000554803 CACNA1DQ01668 2161 aa10.83□□□□□ -0.68
SRP54-205ENST00000554803 TDRD6O60522 2096 aaKnown RBP10.83□□□□□ -0.68
SRP54-205ENST00000554803 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.82□□□□□ -0.68
SRP54-205ENST00000554803 A0A0D9SEW6 157 aa10.82□□□□□ -0.68
SRP54-205ENST00000554803 A0A0J9YVX5 310 aa10.82□□□□□ -0.68
SRP54-205ENST00000554803 CCDC154A6NI56 674 aa10.82□□□□□ -0.68
SRP54-205ENST00000554803 SAC3D1A6NKF1 404 aa10.82□□□□□ -0.68
SRP54-205ENST00000554803 SOCS2O14508 198 aa10.82□□□□□ -0.68
SRP54-205ENST00000554803 MRPS14O60783 128 aaKnown RBP10.82□□□□□ -0.68
SRP54-205ENST00000554803 PRAMEF11O60813 436 aa10.82□□□□□ -0.68
SRP54-205ENST00000554803 TIPRLO75663 272 aa10.82□□□□□ -0.68
SRP54-205ENST00000554803 RHOCP08134 193 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms