RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 FBXO42Q6P3S6 717 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 INO80CQ6PI98 192 aaPredicted RBP12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 EIF1ADQ8N9N8 165 aaKnown RBP12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 DPH7Q9BTV6 452 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 TRIM54Q9BYV2 358 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 TXLNGYQ9BZA5 131 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 DERL2Q9GZP9 239 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 ATG10Q9H0Y0 220 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 SLC6A20Q9NP91 592 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 ENAMQ9NRM1 1142 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 ARL15Q9NXU5 204 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 TAC3Q9UHF0 121 aa12.4□□□□□ -0.42
MTHFD1-208ENST00000554739 SDK2Q58EX2 2172 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 OR2A25A4D2G3 310 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 E7EQ34 232 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 TERTO14746 1132 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 ZNF749O43361 778 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 NRP2O60462 931 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 SRPX2O60687 465 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 CPNE3O75131 537 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 F8A1P23610 371 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 CRABP2P29373 138 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 RORAP35398 523 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 CSRP3P50461 194 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 TBPL1P62380 186 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 CXADRP78310 365 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 GPS2Q13227 327 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 NAE1Q13564 534 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 TSNQ15631 228 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 ZC3H12BQ5HYM0 836 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 TEX35Q5T0J7 233 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 MROH9Q5TGP6 573 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 ZNF425Q6IV72 752 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 FAM199XQ6PEV8 388 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 ZNF517Q6ZMY9 492 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 TRMT10CQ7L0Y3 403 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 CMC1Q7Z7K0 106 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 PAQR7Q86WK9 346 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 GPR135Q8IZ08 494 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 SLC44A1Q8WWI5 657 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 N4BP2L2Q92802 583 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 FBXL8Q96CD0 374 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 LRFN5Q96NI6 719 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 ZNF285Q96NJ3 590 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 PLCD4Q9BRC7 762 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 SGPP1Q9BX95 441 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 PCBD2Q9H0N5 130 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 ACTR5Q9H9F9 607 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 MRPS30Q9NP92 439 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 LHX9Q9NQ69 397 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 CCDC177Q9NQR7 707 aaPredicted RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 ABCF3Q9NUQ8 709 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 PCMTD2Q9NV79 361 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 UTP6Q9NYH9 597 aaKnown RBP12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 CTNNAL1Q9UBT7 734 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 SNX7Q9UNH6 387 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 LHX6Q9UPM6 363 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 AP1M2Q9Y6Q5 423 aa12.39□□□□□ -0.43
MTHFD1-208ENST00000554739 A0A087WUV0 522 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 NPEPPSL1A6NEC2 478 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 MEN1O00255 615 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 CCNDBP1O95273 360 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 GUCA1CO95843 209 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 SLC35E2BP0CK96 405 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 MYBL2P10244 700 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 CD1DP15813 335 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 NPPBP16860 134 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 GMPRP36959 345 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 SLC26A3P40879 764 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 GCGRP47871 477 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 ATP6V0D1P61421 351 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 RELAQ04206 551 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 BMPR2Q13873 1038 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 NAA25Q14CX7 972 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 THEMIS2Q5TEJ8 643 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 ARHGAP40Q5TG30 622 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 TLDC1Q6P9B6 456 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 ADAMTSL2Q86TH1 951 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 OR56A3Q8NH54 315 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 UHMK1Q8TAS1 419 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 ATL1Q8WXF7 558 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 CLIP3Q96DZ5 547 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 MED8Q96G25 268 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 UNKQ9C0B0 810 aaKnown RBP12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 GPN2Q9H9Y4 310 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 CUEDC1Q9NWM3 386 aaPredicted RBP12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 ANKMY1Q9P2S6 941 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 IL17BQ9UHF5 180 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 OARD1Q9Y530 152 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 PCDHGA4Q9Y5G9 962 aa12.38□□□□□ -0.43
MTHFD1-208ENST00000554739 ADAMTS20P59510 1910 aa12.37□□□□□ -0.43
MTHFD1-208ENST00000554739 SMG1Q96Q15 3661 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-208ENST00000554739 LOC105369274A0A096LPK9 316 aa12.37□□□□□ -0.43
MTHFD1-208ENST00000554739 LOC102723532A0A0G2JNH3 316 aa12.37□□□□□ -0.43
MTHFD1-208ENST00000554739 A0A0J9YVX5 310 aa12.37□□□□□ -0.43
MTHFD1-208ENST00000554739 FITM1A5D6W6 292 aa12.37□□□□□ -0.43
MTHFD1-208ENST00000554739 PABPN1LA6NDY0 278 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-208ENST00000554739 H7BY64 318 aa12.37□□□□□ -0.43
MTHFD1-208ENST00000554739 ZSCAN9O15535 394 aaPredicted RBP12.37□□□□□ -0.43
MTHFD1-208ENST00000554739 RIPK2O43353 540 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms