RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 GSTM4Q03013 218 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 ITIH4Q14624 930 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 SPANXN3Q5MJ09 141 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 RHBDD2Q6NTF9 364 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 MED25Q71SY5 747 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 VRK3Q8IV63 474 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 AGGF1Q8N302 714 aaeCLIP10.18□□□□□ -0.78
SHMT2-215ENST00000554656 TMEM102Q8N9M5 508 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-215ENST00000554656 OR13J1Q8NGT2 312 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 FAM76AQ8TAV0 307 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 GSDMBQ8TAX9 411 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 LKAAEAR1Q8TD35 194 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 INPP5DQ92835 1189 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 C19orf60Q96EN9 201 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 DHRS4Q9BTZ2 278 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 MENTQ9BUN1 341 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 SLC22A11Q9NSA0 550 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 GPR83Q9NYM4 423 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 SENP1Q9P0U3 644 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 PSMC3IPQ9P2W1 217 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-215ENST00000554656 DHCR7Q9UBM7 475 aaKnown RBP10.18□□□□□ -0.78
SHMT2-215ENST00000554656 PLEKHB1Q9UF11 243 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-215ENST00000554656 ASF1AQ9Y294 204 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 CACNA1DQ01668 2161 aa10.18□□□□□ -0.78
SHMT2-215ENST00000554656 A0A0J9YY10 115 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 FAM237BA0A1B0GVD1 139 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 DPM1O60762 260 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 AVILO75366 819 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 BANF1O75531 89 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 OR2B3O76000 313 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 USP1O94782 785 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 UMODP07911 640 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 MGAT1P26572 445 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 SSTR1P30872 391 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 GRIA1P42261 906 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 NSG1P42857 185 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 SEMA3AQ14563 771 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 SLC9A5Q14940 896 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 PLEKHN1Q494U1 663 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-215ENST00000554656 PCID2Q5JVF3 399 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 UBAP2Q5T6F2 1119 aaKnown RBP10.17□□□□□ -0.78
SHMT2-215ENST00000554656 FHL5Q5TD97 284 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 VWA5B1Q5TIE3 1220 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 CRYBG3Q68DQ2 2970 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 ADGRD1Q6QNK2 874 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 TAOK1Q7L7X3 1001 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 PPP1R32Q7Z5V6 425 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 RAB43Q86YS6 212 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 IGDCC3Q8IVU1 814 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 TBC1D21Q8IYX1 336 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 GPR135Q8IZ08 494 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 DNAJC22Q8N4W6 341 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 ZNF655Q8N720 491 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-215ENST00000554656 DNAAF3Q8N9W5 541 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 LINC01555Q8NAE3 123 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 OR52K1Q8NGK4 314 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 OR5K2Q8NHB8 316 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 UHMK1Q8TAS1 419 aaKnown RBP10.17□□□□□ -0.78
SHMT2-215ENST00000554656 EPS8L3Q8TE67 593 aaKnown RBP10.17□□□□□ -0.78
SHMT2-215ENST00000554656 FBF1Q8TES7 1133 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 SSC4DQ8WTU2 575 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 ELMO1Q92556 727 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 PNPLA2Q96AD5 504 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 TCTN2Q96GX1 697 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 ZNF778Q96MU6 729 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 RANBP9Q96S59 729 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 DPH2Q9BQC3 489 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-215ENST00000554656 CHRNA10Q9GZZ6 450 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 ZNF180Q9UJW8 692 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 SOX13Q9UN79 622 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 KLHL20Q9Y2M5 609 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 TDRKHQ9Y2W6 561 aaKnown RBP10.17□□□□□ -0.78
SHMT2-215ENST00000554656 PTRH2Q9Y3E5 179 aaKnown RBP10.17□□□□□ -0.78
SHMT2-215ENST00000554656 MAD1L1Q9Y6D9 718 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 CNTRLQ7Z7A1 2325 aa10.17□□□□□ -0.78
SHMT2-215ENST00000554656 TCRBV9S1A1TA0A576 114 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 TLDC2A0PJX2 215 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 FAM159BA6NKW6 160 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 ZSCAN9O15535 394 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 GOT2P00505 430 aaKnown RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 C1QAP02745 245 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 FTH1P02794 183 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 HBQ1P09105 142 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 AGXTP21549 392 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 PKLRP30613 574 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 CCR7P32248 378 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 SERPINB9P50453 376 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 RRADP55042 308 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 CSE1LP55060 971 aaKnown RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 SESN2P58004 480 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 ILF2Q12905 390 aaKnown RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 GRB7Q14451 532 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 LONRF1Q17RB8 773 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 EIF2S3LQ2VIR3 472 aaKnown RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 C4orf17Q53FE4 359 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 CRB2Q5IJ48 1285 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 DCAF10Q5QP82 559 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 MLIPQ5VWP3 458 aa10.16□□□□□ -0.78
SHMT2-215ENST00000554656 MRPL14Q6P1L8 145 aaKnown RBP10.16□□□□□ -0.78
SHMT2-215ENST00000554656 NLRP9Q7RTR0 991 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms