RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HK3P52790 923 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 STC1P52823 247 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 SRP54P61011 504 aaKnown RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 POLR2LP62875 67 aaKnown RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 IFI35P80217 286 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CDK3Q00526 305 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 E2F1Q01094 437 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TUBB3Q13509 450 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 ACOX1Q15067 660 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CDKN3Q16667 212 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 FAXCQ5TGI0 409 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 LRRC66Q68CR7 880 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 PNCKQ6P2M8 343 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CRTC1Q6UUV9 634 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 MFSD7Q6UXD7 560 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 MICALCLQ6ZW33 695 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 USP45Q70EL2 814 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 HEATR4Q86WZ0 1026 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 GAS2L3Q86XJ1 694 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 RFX6Q8HWS3 928 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 MAP7D3Q8IWC1 876 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 SFTPA2Q8IWL1 248 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 FSTL5Q8N475 847 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 PAF1Q8N7H5 531 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 ARL10Q8N8L6 244 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 PSD4Q8NDX1 1056 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 OR56A4Q8NGH8 313 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 CCL4L1Q8NHW4 92 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 MAPK15Q8TD08 544 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 PDCD6IPQ8WUM4 868 aaKnown RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 KRT35Q92764 455 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TADA1Q96BN2 335 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 HSPBAP1Q96EW2 488 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 SCRN2Q96FV2 425 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF830Q96NB3 372 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TRIB3Q96RU7 358 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 WDR24Q96S15 920 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 LYSMD1Q96S90 227 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 LGMNQ99538 433 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 FRMD8Q9BZ67 464 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TRIM5Q9C035 493 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 BRD8Q9H0E9 1235 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 ABCG8Q9H221 673 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 GOLPH3Q9H4A6 298 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 WDR26Q9H7D7 661 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 MRPL40Q9NQ50 206 aaKnown RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 PHPT1Q9NRX4 125 aaPredicted RBP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 RBM22Q9NW64 420 aaKnown RBP eCLIP4.11□□□□□ -1.75
VTI1B-203ENST00000554636 SLC17A6Q9P2U8 582 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 KLQ9UEF7 1012 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 AMACRQ9UHK6 382 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 TFR2Q9UP52 801 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 POLHQ9Y253 713 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 SLC17A4Q9Y2C5 497 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 DGKBQ9Y6T7 804 aa4.11□□□□□ -1.75
VTI1B-203ENST00000554636 DSPP15924 2871 aaKnown RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 hCG_1818297A0A087WSY0 165 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 A0A087WV48 116 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 A0A1W2PQM1 296 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 CPED1A4D0V7 1026 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 PRSS29PA6NIE9 313 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 VWC2LB2RUY7 222 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 KCNK1O00180 336 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 NTN3O00634 580 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 MPPED1O15442 326 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 SPOPO43791 374 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 CSO75390 466 aaKnown RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 C1QL1O75973 258 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 JCHAINP01591 159 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 IVLP07476 585 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 KRT10P13645 584 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ZFXP17010 805 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF30P17039 623 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 FBLP22087 321 aaKnown RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 KELP23276 732 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 PTPN3P26045 913 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 HTR1BP28222 390 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 CD86P42081 329 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 MAGEA1P43355 309 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 RPL26P61254 145 aaKnown RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 DYNLT1P63172 113 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 POU6F2P78424 691 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ARHGEF7Q14155 803 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 GALNT3Q14435 633 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 HLTFQ14527 1009 aaKnown RBP eCLIP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 HLXQ14774 488 aaPredicted RBP4.1□□□□□ -1.75
VTI1B-203ENST00000554636 PDK1Q15118 436 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ELOCQ15369 112 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 ISXQ2M1V0 245 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 COL28A1Q2UY09 1125 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 PGS1Q32NB8 556 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 TBC1D25Q3MII6 688 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 DENND2CQ68D51 928 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 RAET1GQ6H3X3 334 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 C11orf63Q6NUN7 778 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 LVRNQ6Q4G3 990 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 C19orf48Q6RUI8 117 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 KDELC1Q6UW63 502 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 RAD9BQ6WBX8 426 aa4.1□□□□□ -1.75
VTI1B-203ENST00000554636 RBM44Q6ZP01 1051 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms