RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FERD3LQ96RJ6 166 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 CD180Q99467 661 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 MAP3K3Q99759 626 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 EFHD1Q9BUP0 239 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 MYLK2Q9H1R3 596 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 KCNK13Q9HB14 408 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 PDE7BQ9NP56 450 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 TXLNGQ9NUQ3 528 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 COPG2Q9UBF2 871 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 TLK1Q9UKI8 766 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 SLC39A10Q9ULF5 831 aa12.05□□□□□ -0.48
SHMT2-214ENST00000554604 TMEM184BQ9Y519 407 aaPredicted RBP12.05□□□□□ -0.48
SHMT2-214ENST00000554604 IGHV5-51A0A0C4DH38 117 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 FAM95CA0A1B0GW59 222 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 GOLGA8TH3BQL2 631 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 H2AFYO75367 372 aaKnown RBP12.04□□□□□ -0.48
SHMT2-214ENST00000554604 GOT2P00505 430 aaKnown RBP12.04□□□□□ -0.48
SHMT2-214ENST00000554604 FTH1P02794 183 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 ITGB2P05107 769 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 OR56A5P0C7T3 313 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 CPA3P15088 417 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 WT1P19544 449 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-214ENST00000554604 PSMA3P25788 255 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 CRABP2P29373 138 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 PDHA2P29803 388 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 PPARGP37231 505 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-214ENST00000554604 SLC1A2P43004 574 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 PREPP48147 710 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 CYP4F2P78329 520 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 MPP1Q00013 466 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 POU4F1Q01851 419 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 ABHD18Q0P651 414 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 CTBP1Q13363 440 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 TUBB3Q13509 450 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 USP10Q14694 798 aaKnown RBP12.04□□□□□ -0.48
SHMT2-214ENST00000554604 SYTL3Q4VX76 610 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 CES4AQ5XG92 561 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 ZNF470Q6ECI4 717 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 XKR5Q6UX68 686 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 CERS6Q6ZMG9 384 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 TIPARPQ7Z3E1 657 aaKnown RBP12.04□□□□□ -0.48
SHMT2-214ENST00000554604 PPP1R3BQ86XI6 285 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 DENND6AQ8IWF6 608 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 PLD6Q8N2A8 252 aaKnown RBP12.04□□□□□ -0.48
SHMT2-214ENST00000554604 ESX1Q8N693 406 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 ACVR1CQ8NER5 493 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 OR4E2Q8NGC2 313 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 OR13J1Q8NGT2 312 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 OR6Y1Q8NGX8 325 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 OR4L1Q8NH43 312 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 PPP1R14CQ8TAE6 165 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 SREK1Q8WXA9 508 aaKnown RBP12.04□□□□□ -0.48
SHMT2-214ENST00000554604 ELMO1Q92556 727 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 ERP27Q96DN0 273 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 RNF31Q96EP0 1072 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 TMEM120AQ9BXJ8 343 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 SPRY4Q9C004 299 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 OR52A5Q9H2C5 316 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 SRMSQ9H3Y6 488 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 MVB12BQ9H7P6 319 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 CAB39LQ9H9S4 337 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 SAR1AQ9NR31 198 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 LNPEPQ9UIQ6 1025 aa12.04□□□□□ -0.48
SHMT2-214ENST00000554604 A0A087X1B8 175 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 GSAPA4D1B5 854 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 ZNF891A8MT65 544 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 TMEM114B3SHH9 223 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 MATN2O00339 956 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 LIN7AO14910 233 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 HNRNPCL1O60812 293 aaKnown RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 C1QL1O75973 258 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 UNC5CO95185 931 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 ZBTB11O95625 1053 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 DLGAP3O95886 979 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 SLC35E2BP0CK96 405 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 STMN1P16949 149 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 POLR2CP19387 275 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 KPNA2P52292 529 aaKnown RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 RAB10P61026 200 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 HSD11B2P80365 405 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 ACY1Q03154 408 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 BOP1Q14137 746 aaKnown RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 KCNAB1Q14722 419 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 TSNAXIP1Q2TAA8 658 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 AARS2Q5JTZ9 985 aaKnown RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 FAM91A1Q658Y4 838 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 C6orf15Q6UXA7 325 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 RAPH1Q70E73 1250 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 KMT5CQ86Y97 462 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 ZNF843Q8N446 348 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 GALNT6Q8NCL4 622 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 PHC3Q8NDX5 983 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 TFGQ92734 400 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-214ENST00000554604 MED8Q96G25 268 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 SLC41A2Q96JW4 573 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 HGH1Q9BTY7 390 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 TUBB6Q9BUF5 446 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 SLC12A9Q9BXP2 914 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 NMRAL1Q9HBL8 299 aa12.03□□□□□ -0.48
SHMT2-214ENST00000554604 SOHLH2Q9NX45 425 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms