RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SLC36A4Q6YBV0 504 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 MARK2Q7KZI7 788 aaKnown RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SNX20Q7Z614 316 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 LDB1Q86U70 411 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 LONP2Q86WA8 852 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SERPINA9Q86WD7 417 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 DENND6AQ8IWF6 608 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 CNTN4Q8IWV2 1026 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 PQLC1Q8N2U9 271 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 MIER2Q8N344 545 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 DEFB119Q8N690 84 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 CADM4Q8NFZ8 388 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 MDM1Q8TC05 714 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SLC44A1Q8WWI5 657 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 RAB24Q969Q5 203 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 FUBP1Q96AE4 644 aaKnown RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 BIRC7Q96CA5 298 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 AP2M1Q96CW1 435 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 WWC2-AS2Q96NR7 200 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 LENG8Q96PV6 779 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 MYOCQ99972 504 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 FAM167BQ9BTA0 163 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ZSCAN5AQ9BUG6 496 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 C1QTNF7Q9BXJ2 289 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 PCED1AQ9H1Q7 454 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 LDAHQ9H6V9 325 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ASB8Q9H765 288 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 MSL2Q9HCI7 577 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 PPANQ9NQ55 473 aaKnown RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ARGLU1Q9NWB6 273 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SMOXQ9NWM0 555 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF446Q9NWS9 450 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 KCTD5Q9NXV2 234 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 APPL1Q9UKG1 709 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 FBXO5Q9UKT4 447 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 CA5BQ9Y2D0 317 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SLCO1B1Q9Y6L6 691 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 SLC30A1Q9Y6M5 507 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 LAMA1P25391 3075 aa6.19□□□□□ -1.42
SCFD1-212ENST00000554486 FRYLO94915 3013 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 TDRD6O60522 2096 aaKnown RBP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 IGLV3-16A0A075B6K0 115 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 A0A1W2PPC4 97 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 POM121BA6NF01 834 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 PATE3B3GLJ2 98 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 POC1B-GALNT4F8VUJ3 575 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 DYNC1I1O14576 645 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 INPP4BO15327 924 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 OR1I1O60431 355 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 MTX2O75431 263 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 TCEA3O75764 348 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 AHSGP02765 367 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF20P17024 532 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 OGNP20774 298 aaKnown RBP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 FPR1P21462 350 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 HNRNPA2B1P22626 353 aaKnown RBP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ACRV1P26436 265 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 AKT2P31751 481 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 TRIM23P36406 574 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ABCG1P45844 678 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 GPR1P46091 355 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 B4GALNT1Q00973 533 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 MRPL49Q13405 166 aaKnown RBP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 NAB1Q13506 487 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ITGA9Q13797 1035 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 PUM1Q14671 1186 aaKnown RBP eCLIP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ANGPT1Q15389 498 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 KLHL38Q2WGJ6 581 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 FAM214AQ32MH5 1076 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF528Q3MIS6 628 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 GPR33Q49SQ1 333 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 SETMARQ53H47 684 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 FASTKD1Q53R41 847 aaKnown RBP6.18□□□□□ -1.42
SCFD1-212ENST00000554486 GPRC6AQ5T6X5 926 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 RAET1GQ6H3X3 334 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 MRNIPQ6NTE8 343 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 ZNF549Q6P9A3 640 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 CNSTQ6PJW8 725 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 PACS1Q6VY07 963 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 GCNT7Q6ZNI0 430 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 Q6ZSN1 163 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 KIAA0408Q6ZU52 694 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 TAS2R42Q7RTR8 314 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 GALNT7Q86SF2 657 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 GGNQ86UU5 652 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 TRIM74Q86UV6 250 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 SLC26A11Q86WA9 606 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 HEATR4Q86WZ0 1026 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 LRRC6Q86X45 466 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 CTAGE3PQ8IX95 158 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 LMNTD2Q8IXW0 634 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 OTUD6BQ8N6M0 293 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 DENND6BQ8NEG7 585 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 OR5M3Q8NGP4 307 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 NAT14Q8WUY8 206 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 DCAKDQ8WVC6 231 aa6.18□□□□□ -1.42
SCFD1-212ENST00000554486 STON2Q8WXE9 905 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms