RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 WISP1O95388 367 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 PIM1P11309 404 aaPredicted RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 CMPK1P30085 196 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 CASRP41180 1078 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 CSRP3P50461 194 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 RRADP55042 308 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 NFKB2Q00653 900 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 DR1Q01658 176 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 DHX9Q08211 1270 aaKnown RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 GRM7Q14831 915 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 NKAIN1Q4KMZ8 207 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 DESI1Q6ICB0 168 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 UGT3A1Q6NUS8 523 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 MRPL14Q6P1L8 145 aaKnown RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 MED25Q71SY5 747 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 RNF44Q7L0R7 432 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 CNTN4Q8IWV2 1026 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 FAM20CQ8IXL6 584 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 PDIK1LQ8N165 341 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 C2orf73Q8N5S3 287 aaPredicted RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 TMEM102Q8N9M5 508 aaPredicted RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 C2CD4AQ8NCU7 369 aaPredicted RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 CD200R1Q8TD46 325 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 ASB11Q8WXH4 323 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 SMPDL3AQ92484 453 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 INPP5DQ92835 1189 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 FKBP10Q96AY3 582 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 NACC2Q96BF6 587 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 LRRC39Q96DD0 335 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 SLC30A3Q99726 388 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 MIPEPQ99797 713 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 SELENOSQ9BQE4 189 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 AARSD1Q9BTE6 412 aaKnown RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 ING2Q9H160 280 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 MLXIPLQ9NP71 852 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 ZNF71Q9NQZ8 489 aaPredicted RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 ACSS2Q9NR19 701 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 IRAK4Q9NWZ3 460 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 IFT80Q9P2H3 777 aaPredicted RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 DHCR7Q9UBM7 475 aaKnown RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 NDOR1Q9UHB4 597 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 GPN3Q9UHW5 284 aaPredicted RBP9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 TLK1Q9UKI8 766 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 KLHL20Q9Y2M5 609 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 PCDHGB7Q9Y5F8 929 aa9.98□□□□□ -0.81
PTCD2P1-201ENST00000554393 GFYI3L273 518 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 NDC80O14777 642 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 DSCR3O14972 297 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 CTSVO60911 334 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 HAUS5O94927 633 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 CCNDBP1O95273 360 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 IGHEP01854 428 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 ALBP02768 609 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 CTSBP07858 339 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 PSMB5P28074 263 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 FOLR3P41439 243 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 SKIV2L2P42285 1042 aaKnown RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 PAFAH1B1P43034 410 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 MMP16P51512 607 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 PNLIPRP1P54315 467 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 MPP1Q00013 466 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 RELAQ04206 551 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 KLRB1Q12918 225 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 FRG1Q14331 258 aaKnown RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 SSPNQ14714 243 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 FAM214AQ32MH5 1076 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 C1orf189Q5VU69 101 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 CPZQ66K79 652 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 HIBCHQ6NVY1 386 aaPredicted RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 CYHR1Q6ZMK1 362 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 PTRH1Q86Y79 214 aaKnown RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 HPS6Q86YV9 775 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 TTC29Q8NA56 475 aaPredicted RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 OR2Y1Q8NGV0 311 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 CERS2Q96G23 380 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 CAPZA3Q96KX2 299 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 GPR21Q99679 349 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 TRIM55Q9BYV6 548 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 SLC26A1Q9H2B4 701 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 WDR54Q9H977 334 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 IARS2Q9NSE4 1012 aaKnown RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 UTP6Q9NYH9 597 aaKnown RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 TAS2R13Q9NYV9 303 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 TRMT6Q9UJA5 497 aaKnown RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 CORO1CQ9ULV4 474 aaPredicted RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 PYCARDQ9ULZ3 195 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 G3BP2Q9UN86 482 aaKnown RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 RP1L1Q8IWN7 2480 aaPredicted RBP9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 FLNCQ14315 2725 aa9.97□□□□□ -0.81
PTCD2P1-201ENST00000554393 PCSK5Q92824 1860 aa9.96□□□□□ -0.81
PTCD2P1-201ENST00000554393 KRT87PA6NCN2 255 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 ARGFXA6NJG6 315 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 E7ENX8 843 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 ZBTB14O43829 449 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 DNAJB5O75953 348 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 SEC31AO94979 1220 aaKnown RBP9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 SLC16A8O95907 504 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 ERVK-10P10266 1014 aa9.96□□□□□ -0.82
PTCD2P1-201ENST00000554393 RPA3P35244 121 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms