RNA–Protein interactions for RNA: ENST00000554117.1

PNN-203, Transcript of pinin, desmosome associated protein, humanhuman

TSL 2

Gene PNN, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-203ENST00000554117 ACAT2Q9BWD1 397 aa10.29□□□□□ -0.76
PNN-203ENST00000554117 LHPPQ9H008 270 aa10.29□□□□□ -0.76
PNN-203ENST00000554117 SLC26A1Q9H2B4 701 aa10.29□□□□□ -0.76
PNN-203ENST00000554117 SOX17Q9H6I2 414 aaPredicted RBP10.29□□□□□ -0.76
PNN-203ENST00000554117 ABCF3Q9NUQ8 709 aa10.29□□□□□ -0.76
PNN-203ENST00000554117 MARCH4Q9P2E8 410 aaPredicted RBP10.29□□□□□ -0.76
PNN-203ENST00000554117 KLHL20Q9Y2M5 609 aa10.29□□□□□ -0.76
PNN-203ENST00000554117 JRKLQ9Y4A0 524 aa10.29□□□□□ -0.76
PNN-203ENST00000554117 MAD1L1Q9Y6D9 718 aa10.29□□□□□ -0.76
PNN-203ENST00000554117 PCSK5Q92824 1860 aa10.29□□□□□ -0.76
PNN-203ENST00000554117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
PNN-203ENST00000554117 NSG1A0A0A6YYJ2 146 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 FAM237BA0A1B0GVD1 139 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 DYTNA2CJ06 578 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 GOLGA8KD6RF30 607 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 GOLGA8TH3BQL2 631 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 PGRMC1O00264 195 aaKnown RBP10.28□□□□□ -0.76
PNN-203ENST00000554117 NIPSNAP2O75323 286 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 TPBGLP0DKB5 382 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 EZRP15311 586 aaKnown RBP10.28□□□□□ -0.76
PNN-203ENST00000554117 FDXRP22570 491 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 HRH2P25021 359 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 GRK3P35626 688 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 OR1D4P47884 311 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 AVPR1BP47901 424 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 PNLIPRP1P54315 467 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 SKP1P63208 163 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 ABATP80404 500 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 C4orf17Q53FE4 359 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 FCRL6Q6DN72 434 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 CCDC137Q6PK04 289 aaKnown RBP10.28□□□□□ -0.76
PNN-203ENST00000554117 FAM180AQ6UWF9 173 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 CES3Q6UWW8 571 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 IGFL3Q6UXB1 125 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 PPP1R32Q7Z5V6 425 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 PCGF5Q86SE9 256 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 CILP2Q8IUL8 1156 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 TBC1D19Q8N5T2 526 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 METTL27Q8N6F8 245 aaPredicted RBP10.28□□□□□ -0.76
PNN-203ENST00000554117 RBMXL3Q8N7X1 1067 aaKnown RBP10.28□□□□□ -0.76
PNN-203ENST00000554117 SUN3Q8TAQ9 357 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 DNAJB14Q8TBM8 379 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 PPP4R1Q8TF05 950 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 METTL21AQ8WXB1 218 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 LPGAT1Q92604 370 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 THOC3Q96J01 351 aaKnown RBP10.28□□□□□ -0.76
PNN-203ENST00000554117 CNDP1Q96KN2 507 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 C5orf34Q96MH7 638 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 FAM167BQ9BTA0 163 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 SLC6A20Q9NP91 592 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 C14orf105Q9NVL8 296 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 FBXL4Q9UKA2 621 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 NFS1Q9Y697 457 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 MAU2Q9Y6X3 613 aa10.28□□□□□ -0.76
PNN-203ENST00000554117 FITM1A5D6W6 292 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 ANKUB1A6NFN9 424 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 H3BMH7 237 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 EIF3FO00303 357 aaPredicted RBP10.27□□□□□ -0.77
PNN-203ENST00000554117 ZSCAN12O43309 604 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 HCRTR1O43613 425 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 MATN4O95460 622 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 HPP00738 406 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 HEXBP07686 556 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 HIST1H2AGP0C0S8 130 aaPredicted RBP10.27□□□□□ -0.77
PNN-203ENST00000554117 MPC1LP0DKB6 136 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 ICAM2P13598 275 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 HIST1H2ADP20671 130 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 PSMB5P28074 263 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 UQCRFS1P47985 274 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 EMP3P54852 163 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 SRSF1Q07955 248 aaKnown RBP eCLIP10.27□□□□□ -0.77
PNN-203ENST00000554117 CDC16Q13042 620 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 GRB7Q14451 532 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 KCNJ11Q14654 390 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 NR6A1Q15406 480 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 SIX1Q15475 284 aaPredicted RBP10.27□□□□□ -0.77
PNN-203ENST00000554117 LONRF1Q17RB8 773 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 CTSL3PQ5NE16 218 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 MFSD4BQ5TF39 518 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 GARNL3Q5VVW2 1013 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 ICE2Q659A1 982 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 B3GNTL1Q67FW5 361 aaPredicted RBP10.27□□□□□ -0.77
PNN-203ENST00000554117 MICALCLQ6ZW33 695 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 RNF44Q7L0R7 432 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 PARP9Q8IXQ6 854 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 KBTBD2Q8IY47 623 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 CISD2Q8N5K1 135 aaKnown RBP10.27□□□□□ -0.77
PNN-203ENST00000554117 OR2A1Q8NGT9 310 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 ANP32BQ92688 251 aaKnown RBP10.27□□□□□ -0.77
PNN-203ENST00000554117 INPP5DQ92835 1189 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 FAM136AQ96C01 138 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 MMABQ96EY8 250 aaPredicted RBP10.27□□□□□ -0.77
PNN-203ENST00000554117 HIST1H2AHQ96KK5 128 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 HIST1H2AJQ99878 128 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 NAT9Q9BTE0 207 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 H2AFJQ9BTM1 129 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 MENTQ9BUN1 341 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 TRIM54Q9BYV2 358 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 PCBD2Q9H0N5 130 aa10.27□□□□□ -0.77
PNN-203ENST00000554117 ZNF552Q9H707 407 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms