RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 POLEQ07864 2286 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 HYKKA2RU49 373 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FITM1A5D6W6 292 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CLEC18AA5D8T8 446 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 KIF5CO60282 957 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SRPX2O60687 465 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 DPM1O60762 260 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PHF2O75151 1096 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SORBS2O94875 1100 aaKnown RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 EIF2S1P05198 315 aaKnown RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ERGP11308 486 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PIM1P11309 404 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SLC1A2P43004 574 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MAGEA3P43357 314 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 UQCRFS1P47985 274 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CUL1Q13616 776 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 TSTA3Q13630 321 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 NKG7Q16617 165 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PRR30Q53SZ7 412 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 YOD1Q5VVQ6 348 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FBXO42Q6P3S6 717 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SUSD1Q6UWL2 747 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CLEC18BQ6UXF7 455 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SHISA6Q6ZSJ9 500 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 GALNT16Q8N428 558 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 NAT8LQ8N9F0 302 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 Q8NA96 180 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CLEC1AQ8NC01 280 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CLEC18CQ8NCF0 446 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 GIMAP7Q8NHV1 300 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ACTRT1Q8TDG2 376 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SMPDL3AQ92484 453 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FKBP10Q96AY3 582 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SOX17Q9H6I2 414 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 WDR54Q9H977 334 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SLC6A20Q9NP91 592 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FAM114A2Q9NRY5 505 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 C20orf96Q9NUD7 363 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CTSFQ9UBX1 484 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ZC3H7BQ9UGR2 993 aaKnown RBP11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MED16Q9Y2X0 877 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MAP4K5Q9Y4K4 846 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MAU2Q9Y6X3 613 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FAM169AQ9Y6X4 670 aa11.37□□□□□ -0.59
TRAPPC6B-204ENST00000554018 OR2A25A4D2G3 310 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 H0YGG7 62 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ALOX12BO75342 701 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 IGHEP01854 428 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ALBP02768 609 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CATP04040 527 aaKnown RBP11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 GNLYP22749 145 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MMP11P24347 488 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CMPK1P30085 196 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 RPA3P35244 121 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FNTAP49354 379 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PNLIPRP1P54315 467 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ARF3P61204 181 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MPP1Q00013 466 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MYBPC3Q14896 1274 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PPP1R7Q15435 360 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 INPP5JQ15735 1006 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 LONRF1Q17RB8 773 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FAM214AQ32MH5 1076 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 TTLL9Q3SXZ7 439 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 HSP90AA5PQ58FG0 334 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 RNASEH2BQ5TBB1 312 aaKnown RBP11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 VWA5B1Q5TIE3 1220 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SLC6A19Q695T7 634 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 NEK10Q6ZWH5 1172 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 RNF44Q7L0R7 432 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 HPS6Q86YV9 775 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PPIL6Q8IXY8 311 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 GALNT11Q8NCW6 608 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PPFIBP2Q8ND30 876 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 GRK7Q8WTQ7 553 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ASB11Q8WXH4 323 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 INPP5DQ92835 1189 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 PNPLA2Q96AD5 504 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SPSB2Q99619 263 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 GPR21Q99679 349 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SLC26A1Q9H2B4 701 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CCDC68Q9H2F9 335 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SYNPO2LQ9H987 977 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 MRPS30Q9NP92 439 aaKnown RBP11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ATP13A2Q9NQ11 1180 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SLAMF7Q9NQ25 335 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 TRMT1Q9NXH9 659 aaKnown RBP11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 C5AR2Q9P296 337 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ANKMY1Q9P2S6 941 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 CDC23Q9UJX2 597 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FBXL4Q9UKA2 621 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 FBXO5Q9UKT4 447 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 SNX12Q9UMY4 172 aa11.36□□□□□ -0.59
TRAPPC6B-204ENST00000554018 IGKV1-8A0A0C4DH67 115 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 GOLGA6L10A0A0M3HER8 536 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 AGPSO00116 658 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 ZSCAN12O43309 604 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 VPS4BO75351 444 aa11.35□□□□□ -0.59
TRAPPC6B-204ENST00000554018 HAUS5O94927 633 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms