RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CXADRP78310 365 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 CUL1Q13616 776 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 SF1Q15637 639 aaKnown RBP8.05□□□□□ -1.12
PSEN1-209ENST00000553855 SLC5A12Q1EHB4 618 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 THEMIS2Q5TEJ8 643 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 FBXO38Q6PIJ6 1188 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 C19orf48Q6RUI8 117 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 C6orf15Q6UXA7 325 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-209ENST00000553855 UBE2R2Q712K3 238 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-209ENST00000553855 TAX1BP1Q86VP1 789 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 JAZF1Q86VZ6 243 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 TMEM126BQ8IUX1 230 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 IGDCC3Q8IVU1 814 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 CTAGE3PQ8IX95 158 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 CPNE9Q8IYJ1 553 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 ADGRF3Q8IZF5 1079 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 UNC5BQ8IZJ1 945 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 NLGN4XQ8N0W4 816 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 VWA5B2Q8N398 1253 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 D2HGDHQ8N465 521 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 NKAPQ8N5F7 415 aaKnown RBP8.05□□□□□ -1.12
PSEN1-209ENST00000553855 ESX1Q8N693 406 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 C19orf47Q8N9M1 422 aaKnown RBP8.05□□□□□ -1.12
PSEN1-209ENST00000553855 NLGN4YQ8NFZ3 816 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-209ENST00000553855 OR9A1PQ8NGU1 263 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 OR2L8Q8NGY9 312 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 FBXO25Q8TCJ0 367 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 DENND1AQ8TEH3 1009 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 SMPDL3AQ92484 453 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 ANAPC16Q96DE5 110 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 TSPAN17Q96FV3 270 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 NDNQ99608 321 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 GRHL1Q9NZI5 618 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 SEMA5BQ9P283 1151 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 VWA7Q9Y334 891 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 NFS1Q9Y697 457 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 FASNP49327 2511 aaKnown RBP8.05□□□□□ -1.12
PSEN1-209ENST00000553855 MYLKQ15746 1914 aa8.05□□□□□ -1.12
PSEN1-209ENST00000553855 FAM208BQ5VWN6 2430 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 ZFC3H1O60293 1989 aaKnown RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 SETXQ7Z333 2677 aaKnown RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 ESYT3A0FGR9 886 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 FAM221AA4D161 298 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 TMEM150CB9EJG8 249 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 SLC16A5O15375 505 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 PSIP1O75475 530 aaKnown RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 SCRG1O75711 98 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 KIAA0754O94854 1291 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 MATN4O95460 622 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 KLK3P07288 261 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 FGF5P12034 268 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 ITPKBP27987 946 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 CMPK1P30085 196 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 SSTR1P30872 391 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 SPRP35270 261 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 PPP1CAP62136 330 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 MC1RQ01726 317 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 TLE3Q04726 772 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 SP140Q13342 867 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 NAB1Q13506 487 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 MPP2Q14168 576 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 MAP7Q14244 749 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 ARHGAP19Q14CB8 494 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 FASTKD3Q14CZ7 662 aaKnown RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 COL28A1Q2UY09 1125 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 ZC3H12BQ5HYM0 836 aaKnown RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 HECTD2Q5U5R9 776 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 ZNF549Q6P9A3 640 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 TRMT10BQ6PF06 316 aaKnown RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 GPR155Q7Z3F1 870 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 IFT20Q8IY31 132 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 SYTL1Q8IYJ3 562 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 C2orf73Q8N5S3 287 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 BMPERQ8N8U9 685 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 FBXO27Q8NI29 283 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 CD200R1Q8TD46 325 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 ATL1Q8WXF7 558 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 CLIP3Q96DZ5 547 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 LINGO1Q96FE5 620 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 IL17FQ96PD4 163 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 TRAPPC9Q96Q05 1148 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 FMO2Q99518 471 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 CPNE1Q99829 537 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 PITPNM3Q9BZ71 974 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 GPN2Q9H9Y4 310 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 APMAPQ9HDC9 416 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 SIDT1Q9NXL6 827 aaKnown RBP8.04□□□□□ -1.12
PSEN1-209ENST00000553855 MOCS1Q9NZB8 636 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 CIDEBQ9UHD4 219 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 PADI1Q9ULC6 663 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 BTRCQ9Y297 605 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 IKBKGQ9Y6K9 419 aa8.04□□□□□ -1.12
PSEN1-209ENST00000553855 UNC13CQ8NB66 2214 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 FAM95CA0A1B0GW59 222 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 EIF4E1BA6NMX2 242 aaKnown RBP8.03□□□□□ -1.12
PSEN1-209ENST00000553855 ARHGEF33A8MVX0 844 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 E7EQ34 232 aa8.03□□□□□ -1.12
PSEN1-209ENST00000553855 F7P08709 466 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms