RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 TMEM114B3SHH9 223 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SUPT3HB4E1H0 165 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SLCO1B7G3V0H7 640 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 G3V2L1 256 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 STX16-NPEPL1H3BU86 382 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 GFYI3L273 518 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 K7ESF4 209 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 K7ESM1 405 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 BTN3A1O00481 513 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 STX16O14662 325 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SHOXO15266 292 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 GPR39O43194 453 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PI15O43692 258 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 DFNA5O60443 496 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 NPHS1O60500 1241 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 KERAO60938 352 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SUPT3HO75486 399 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 RASGRP1O95267 797 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 WISP3O95389 354 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SERPINE1P05121 402 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 IGHV4-34P06331 123 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 VIMP08670 466 aaKnown RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 THEGLP0DJG4 465 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 GFAPP14136 432 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 LSP1P33241 339 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CA5AP35218 305 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 IGFALSP35858 605 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 HSD17B2P37059 387 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 HALP42357 657 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 GLRBP48167 497 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SEPHS1P49903 392 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CTSCP53634 463 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ALDH18A1P54886 795 aaKnown RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 C21orf59P57076 290 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SRP54P61011 504 aaKnown RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PPP2CBP62714 309 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PPP2CAP67775 309 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 IRX4P78413 519 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 IRF9Q00978 393 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 TIAL1Q01085 375 aaKnown RBP eCLIP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 GUCY1A3Q02108 690 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 DMPKQ09013 629 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 GALNT1Q10472 559 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 DLG1Q12959 904 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ABRQ12979 859 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 KRT33BQ14525 404 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 GBX1Q14549 363 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ZNF460Q14592 562 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 TGFBIQ15582 683 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CHI3L2Q15782 390 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ZNF528Q3MIS6 628 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PLEKHN1Q494U1 663 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PYCR3Q53H96 274 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ACSBG2Q5FVE4 666 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 TECRLQ5HYJ1 363 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 METRNLQ641Q3 311 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ANKS6Q68DC2 871 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 DOK6Q6PKX4 331 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 TMEM207Q6UWW9 146 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 UNC5DQ6UXZ4 953 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 WASH2PQ6VEQ5 465 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 RPTNQ6XPR3 784 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CDHR3Q6ZTQ4 885 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 UBE2R2Q712K3 238 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CEP68Q76N32 757 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CHST15Q7LFX5 561 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ABI3BPQ7Z7G0 1075 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CRLF3Q8IUI8 442 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 WDR75Q8IWA0 830 aaKnown RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CPNE9Q8IYJ1 553 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 TBC1D21Q8IYX1 336 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SLC22A15Q8IZD6 547 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 FBXO39Q8N4B4 442 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PNPLA1Q8N8W4 532 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 C19orf47Q8N9M1 422 aaKnown RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 AVL9Q8NBF6 648 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ACVR1CQ8NER5 493 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 SETD7Q8WTS6 366 aaKnown RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ANKRD49Q8WVL7 239 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ZFPM2Q8WW38 1151 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 DNASE2BQ8WZ79 361 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 RAD51AP1Q96B01 352 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CHMP6Q96FZ7 201 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 MAGEB10Q96LZ2 347 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 CCDC138Q96M89 665 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PTCHD1Q96NR3 888 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 GPR78Q96P69 363 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 OR2M4Q96R27 311 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 EGFL8Q99944 293 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 TRMOQ9BU70 441 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 LGR4Q9BXB1 951 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 GSDMCQ9BYG8 508 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PITPNM3Q9BZ71 974 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ILKAPQ9H0C8 392 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 EPN3Q9H201 632 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 ALG9Q9H6U8 611 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 YY1AP1Q9H869 796 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 WASH6PQ9NQA3 447 aa4.88□□□□□ -1.63
VTI1B-202ENST00000553619 PRMT8Q9NR22 394 aaPredicted RBP4.88□□□□□ -1.63
VTI1B-202ENST00000553619 KLC4Q9NSK0 619 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms