RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 SLC9A4Q6AI14 798 aa13.09□□□□□ -0.31
PRPF39-204ENST00000553605 H3F3CQ6NXT2 135 aa13.09□□□□□ -0.31
PRPF39-204ENST00000553605 TMEM205Q6UW68 189 aa13.09□□□□□ -0.31
PRPF39-204ENST00000553605 SNX20Q7Z614 316 aa13.09□□□□□ -0.31
PRPF39-204ENST00000553605 CD163Q86VB7 1156 aa13.09□□□□□ -0.31
PRPF39-204ENST00000553605 CCDC71Q8IV32 467 aaPredicted RBP13.09□□□□□ -0.31
PRPF39-204ENST00000553605 C2orf73Q8N5S3 287 aaPredicted RBP13.09□□□□□ -0.31
PRPF39-204ENST00000553605 CLDN19Q8N6F1 224 aa13.09□□□□□ -0.31
PRPF39-204ENST00000553605 LINC01555Q8NAE3 123 aa13.09□□□□□ -0.31
PRPF39-204ENST00000553605 OXNAD1Q96HP4 312 aaPredicted RBP13.09□□□□□ -0.31
PRPF39-204ENST00000553605 GPATCH1Q9BRR8 931 aaKnown RBP13.09□□□□□ -0.31
PRPF39-204ENST00000553605 C14orf105Q9NVL8 296 aa13.09□□□□□ -0.31
PRPF39-204ENST00000553605 IGLV3-16A0A075B6K0 115 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 C5orf60A6NFR6 353 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 LRRC10BA6NIK2 292 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 FAM171A2A8MVW0 826 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 APOL1O14791 398 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 FFAR3O14843 346 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 GPR42O15529 346 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 CTSVO60911 334 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 CYP1A2P05177 515 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 EIF2S1P05198 315 aaKnown RBP13.08□□□□□ -0.32
PRPF39-204ENST00000553605 SP1P08047 785 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 SKILP12757 684 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 ZNF24P17028 368 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 PKLRP30613 574 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 PTGER1P34995 402 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 TAZQ16635 292 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 MUM1Q2TAK8 710 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 RNFT1Q5M7Z0 435 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 E4F1Q66K89 784 aaPredicted RBP13.08□□□□□ -0.32
PRPF39-204ENST00000553605 FRMPD2BQ6IN97 320 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 SLC25A25Q6KCM7 469 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 ZZZ3Q8IYH5 903 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 HORMAD2Q8N7B1 307 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 LMNTD1Q8N9Z9 388 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 MYRIPQ8NFW9 859 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 GOT1L1Q8NHS2 421 aaPredicted RBP13.08□□□□□ -0.32
PRPF39-204ENST00000553605 ZUFSPQ96AP4 578 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 FCRL5Q96RD9 977 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 MAK16Q9BXY0 300 aaKnown RBP13.08□□□□□ -0.32
PRPF39-204ENST00000553605 RASSF1Q9NS23 344 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 CDC14AQ9UNH5 594 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 L3MBTL1Q9Y468 752 aa13.08□□□□□ -0.32
PRPF39-204ENST00000553605 A0A1B0GTH9 108 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 USP27XA6NNY8 438 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 TARM1B6A8C7 271 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 ABCB7O75027 752 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 SUN1O94901 812 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 LY6G6DO95868 133 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 S1PR4O95977 384 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 C8BP07358 591 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 CD9P21926 228 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 CDKN1CP49918 316 aaPredicted RBP13.07□□□□□ -0.32
PRPF39-204ENST00000553605 OC90Q02509 493 aaPredicted RBP13.07□□□□□ -0.32
PRPF39-204ENST00000553605 PMPCAQ10713 525 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 WASHC5Q12768 1159 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 MPP3Q13368 585 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 MAPKAPK3Q16644 382 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 MEP1AQ16819 746 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 BTBD16Q32M84 506 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 GPR33Q49SQ1 333 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 TAX1BP1Q86VP1 789 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 CRLF3Q8IUI8 442 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 OR13C4Q8NGS5 318 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 FICDQ9BVA6 458 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 FSD1LQ9BXM9 530 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 TGIF2Q9GZN2 237 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 KCNK13Q9HB14 408 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 GNPTGQ9UJJ9 305 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 FAM169AQ9Y6X4 670 aa13.07□□□□□ -0.32
PRPF39-204ENST00000553605 LOC105369274A0A096LPK9 316 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 LOC102723532A0A0G2JNH3 316 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 A0A0J9YVX5 310 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 LRRD1A4D1F6 860 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 PRPF4O43172 522 aaKnown RBP eCLIP13.06□□□□□ -0.32
PRPF39-204ENST00000553605 NEURL1O76050 574 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 SEC24DO94855 1032 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-204ENST00000553605 PROSCO94903 275 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 AGTP01019 485 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 C8orf89P0DMQ9 161 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 ZFXP17010 805 aaPredicted RBP13.06□□□□□ -0.32
PRPF39-204ENST00000553605 ACRV1P26436 265 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 PCSK6P29122 969 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 HOXC12P31275 282 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 ARHGAP25P42331 645 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 DLX5P56178 289 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 DEFB113Q30KQ7 82 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 PLAG1Q6DJT9 500 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 PID1Q7Z2X4 250 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 SERPINA9Q86WD7 417 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 CDC20BQ86Y33 519 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 OR4N4Q8N0Y3 316 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 CPSF7Q8N684 471 aaKnown RBP13.06□□□□□ -0.32
PRPF39-204ENST00000553605 ELMO1Q92556 727 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 SEC16BQ96JE7 1060 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 CABS1Q96KC9 395 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 C10orf90Q96M02 699 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 PWWP2AQ96N64 755 aa13.06□□□□□ -0.32
PRPF39-204ENST00000553605 OLFM1Q99784 485 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms