RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 GLCEO94923 617 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 ACAA1P09110 424 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-209ENST00000553280 GAP43P17677 238 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 TYMPP19971 482 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 CYP2A7P20853 494 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 SERPINH1P50454 418 aaKnown RBP4.68□□□□□ -1.66
SCFD1-209ENST00000553280 VAMP7P51809 220 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 FUT6P51993 359 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 MBTD1Q05BQ5 628 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 CACNG1Q06432 222 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 KLC1Q07866 573 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 GAGE5Q13069 117 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 GAGE6Q13070 117 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 NONOQ15233 471 aaKnown RBP eCLIP4.68□□□□□ -1.66
SCFD1-209ENST00000553280 ODF4Q2M2E3 257 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 TTC31Q49AM3 519 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-209ENST00000553280 LYSMD4Q5XG99 296 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 CORO6Q6QEF8 472 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 IL17RELQ6ZVW7 336 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 ZNF554Q86TJ5 538 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 MMD2Q8IY49 270 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 NOA1Q8NC60 698 aaKnown RBP4.68□□□□□ -1.66
SCFD1-209ENST00000553280 PIGBQ92521 554 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 EEF2KMTQ96G04 330 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 CDKN2AIPNLQ96HQ2 116 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 CDK19Q9BWU1 502 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 TRIM7Q9C029 511 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 HMG20BQ9P0W2 317 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 ZDHHC2Q9UIJ5 367 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 HBS1LQ9Y450 684 aaKnown RBP4.68□□□□□ -1.66
SCFD1-209ENST00000553280 KLK4Q9Y5K2 254 aa4.68□□□□□ -1.66
SCFD1-209ENST00000553280 IGHV4OR15-8A0A075B7B6 117 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 ARPC2O15144 300 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 SLC28A2O43868 658 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 CTSVO60911 334 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 OAZ2O95190 189 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 SERPING1P05155 500 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PTMAP06454 111 aaKnown RBP4.67□□□□□ -1.66
SCFD1-209ENST00000553280 SCP2P22307 547 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PIK3R1P27986 724 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 GLIPR1P48060 266 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 UCP2P55851 309 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 WASHC5Q12768 1159 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 KIF5AQ12840 1032 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 SNTA1Q13424 505 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 RBBP7Q16576 425 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PHKG1Q16816 387 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 STXBP5Q5T5C0 1151 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 LRRC38Q5VT99 294 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 OR4A47Q6IF82 309 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 ETFRF1Q6IPR1 90 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PRSS42Q7Z5A4 293 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PLD3Q8IV08 490 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 AQP12AQ8IXF9 295 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 KLHDC8AQ8IYD2 350 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-209ENST00000553280 LRRC8CQ8TDW0 803 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 GRHL3Q8TE85 626 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 RSPH1Q8WYR4 309 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 HSD17B8Q92506 261 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 ZBTB9Q96C00 473 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PYCR2Q96C36 320 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 RTP4Q96DX8 246 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 ZNF48Q96MX3 618 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-209ENST00000553280 FCRL4Q96PJ5 515 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PANX3Q96QZ0 392 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PKP4Q99569 1192 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 LRRC1Q9BTT6 524 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PANK2Q9BZ23 570 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 ZMYND12Q9H0C1 365 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 P2RY12Q9H244 342 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 TLE6Q9H808 572 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 A4GALTQ9NPC4 353 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 PTTG2Q9NZH5 202 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 MALT1Q9UDY8 824 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 FETUBQ9UGM5 382 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 MAD2L2Q9UI95 211 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 GMEB2Q9UKD1 530 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 SLC7A7Q9UM01 511 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 CHKBQ9Y259 395 aa4.67□□□□□ -1.66
SCFD1-209ENST00000553280 MYMKA6NI61 221 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 SLC9B1P1A6NJY1 282 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 PRSS46E5RG02 174 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 CACNB4O00305 520 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-209ENST00000553280 PAPSS2O95340 614 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-209ENST00000553280 PIGNO95427 931 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 STAG3L1P0CL83 205 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 PCP11498 1178 aaKnown RBP4.66□□□□□ -1.66
SCFD1-209ENST00000553280 NKX2-1P43699 371 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-209ENST00000553280 OR3A1P47881 315 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 PDLIM4P50479 330 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 LTBQ06643 244 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 PRAMEF8Q5VWM4 474 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 KCTD11Q693B1 232 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 C9orf47Q6ZRZ4 202 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 CREB3L2Q70SY1 520 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 GPR141Q7Z602 305 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 KIAA0895Q8NCT3 520 aa4.66□□□□□ -1.66
SCFD1-209ENST00000553280 OR1J1Q8NGS3 322 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms