RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 RCAN2Q14206 197 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 ATG9BQ674R7 924 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 CYP20A1Q6UW02 462 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 RNF175Q8N4F7 328 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 CCL4L1Q8NHW4 92 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 TMEM168Q9H0V1 697 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 EHD1Q9H4M9 534 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 TMEM45AQ9NWC5 275 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 ASIC5Q9NY37 505 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 DYRK1BQ9Y463 629 aa18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 POLR3HQ9Y535 204 aaPredicted RBP18.9■□□□□ 0.62
RBFOX1-215ENST00000553186 NR5A2O00482 541 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 SEC22BO75396 215 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 IL12AP29459 219 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 TBL3Q12788 808 aaKnown RBP18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 RPE65Q16518 533 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 VPS26BQ4G0F5 336 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 PRAMEF14Q5SWL7 426 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 PRAMEF13Q5VWM6 474 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 LCTLQ6UWM7 567 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 ABRAXAS1Q6UWZ7 409 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 C16orf89Q6UX73 402 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 RETREG3Q86VR2 466 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 UBALD2Q8IYN6 164 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 PGAM4Q8N0Y7 254 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 SPEM1Q8N4L4 309 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 LINC01555Q8NAE3 123 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 PJA1Q8NG27 643 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 OR7G3Q8NG95 312 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 SLC5A11Q8WWX8 675 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 CAMK1GQ96NX5 476 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 GPR27Q9NS67 375 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 PCDHGA11Q9Y5H2 935 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 SLCO1B1Q9Y6L6 691 aa18.89■□□□□ 0.62
RBFOX1-215ENST00000553186 EML2O95834 649 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 C1GALT1C1LP0DN25 315 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 NUDT1P36639 197 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 MAD2L1Q13257 205 aaPredicted RBP18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 MMEL1Q495T6 779 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 ADNP2Q6IQ32 1131 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 NXPE4Q6UWF7 544 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 WASH2PQ6VEQ5 465 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 PARP9Q8IXQ6 854 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 TSPEARQ8WU66 669 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 WDR60Q8WVS4 1066 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 RASSF4Q9H2L5 321 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 WDR41Q9HAD4 459 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 WASH6PQ9NQA3 447 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 SPATA6Q9NWH7 488 aaPredicted RBP18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 GEMIN8Q9NWZ8 242 aaKnown RBP18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 PCOLCE2Q9UKZ9 415 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 DGKBQ9Y6T7 804 aa18.89■□□□□ 0.61
RBFOX1-215ENST00000553186 A0A1W2PPV9 198 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 BBIP1A8MTZ0 92 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 DPP6P42658 865 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 THEMIS2Q5TEJ8 643 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 MTERF1Q99551 399 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 HAUS8Q9BT25 410 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 MVB12BQ9H7P6 319 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 CAAP1Q9H8G2 361 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 TRNAU1APQ9NX07 287 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 NDE1Q9NXR1 346 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 EIF3LQ9Y262 564 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 PRAMEF33A0A0G2JMD5 474 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 MRASO14807 208 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 ATP6V1G2O95670 118 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 MTHFD1P11586 935 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 YBX1P67809 324 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 CSTF3Q12996 717 aaKnown RBP18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 MTAPQ13126 283 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 TCEA2Q15560 299 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 WASHC2DQ5SRD0 308 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 SMPDL3AQ92484 453 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 SPDL1Q96EA4 605 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 CMTM7Q96FZ5 175 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 APIPQ96GX9 242 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 EFCAB11Q9BUY7 163 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 MAP10Q9P2G4 905 aa18.88■□□□□ 0.61
RBFOX1-215ENST00000553186 DNAH14Q0VDD8 3507 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 ZNF839A8K0R7 811 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 RASGRP1O95267 797 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 JAK1P23458 1154 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 SLBPQ14493 270 aaKnown RBP eCLIP18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 PTGR1Q14914 329 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 MED27Q6P2C8 311 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 NRROSQ86YC3 692 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 HID1Q8IV36 788 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 LAS2Q8IYD9 372 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 GJD3Q8N144 294 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 ACAT2Q9BWD1 397 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 SPNS1Q9H2V7 528 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 TAC3Q9UHF0 121 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 PRPF19Q9UMS4 504 aaKnown RBP18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 PCDHGA7Q9Y5G6 932 aa18.87■□□□□ 0.61
RBFOX1-215ENST00000553186 A0A1W2PP18 115 aa18.86■□□□□ 0.61
RBFOX1-215ENST00000553186 FAM234BA2RU67 622 aa18.86■□□□□ 0.61
RBFOX1-215ENST00000553186 A6NCN8 305 aa18.86■□□□□ 0.61
RBFOX1-215ENST00000553186 ASPDHA6ND91 283 aa18.86■□□□□ 0.61
RBFOX1-215ENST00000553186 ENTPD5O75356 428 aa18.86■□□□□ 0.61
RBFOX1-215ENST00000553186 SORBS2O94875 1100 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms