RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 SLAMF8Q9P0V8 285 aa7.17□□□□□ -1.26
BEST3-212ENST00000553096 DNMT3BQ9UBC3 853 aaKnown RBP7.17□□□□□ -1.26
BEST3-212ENST00000553096 USP22Q9UPT9 525 aa7.17□□□□□ -1.26
BEST3-212ENST00000553096 TMEM5Q9Y2B1 443 aa7.17□□□□□ -1.26
BEST3-212ENST00000553096 RPH3AQ9Y2J0 694 aaPredicted RBP7.17□□□□□ -1.26
BEST3-212ENST00000553096 SPEF1Q9Y4P9 236 aa7.17□□□□□ -1.26
BEST3-212ENST00000553096 PDE4DIPQ5VU43 2346 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 CXCR6O00574 342 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 E2F3O00716 465 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 NOBOXO60393 691 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 CXCL10P02778 98 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 HMGA1P17096 107 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 NR4A1P22736 598 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 UGT2B10P36537 528 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 PIGAP37287 484 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 DCTP40126 519 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 EIF2DP41214 584 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 RGS19P49795 217 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 MNX1P50219 401 aaPredicted RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 GABREP78334 506 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 RING1Q06587 406 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 CYP4F3Q08477 520 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 DNASE1L3Q13609 305 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 C5orf22Q49AR2 442 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 SLX4IPQ5VYV7 408 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 AFTPHQ6ULP2 937 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 CYP20A1Q6UW02 462 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 RBM23Q86U06 439 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 NDNFQ8TB73 568 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 FUBP1Q96AE4 644 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 PPP3R2Q96LZ3 170 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 RPRD1AQ96P16 312 aaPredicted RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 TMEM175Q9BSA9 504 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 SCUBE2Q9NQ36 999 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 OLA1Q9NTK5 396 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 UXTQ9UBK9 157 aaPredicted RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 TESMINQ9Y4I5 508 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 TNPO3Q9Y5L0 923 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 FAM220BPB1ANY3 271 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 TOR1BO14657 336 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 RGS13O14921 159 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 RGS10O43665 173 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 PRAMEF11O60813 436 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 VPS26AO75436 327 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 KLKB1P03952 638 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 SFTPCP11686 197 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 OR1E1P30953 314 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 RGRP47804 291 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 NRIP1P48552 1158 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 IL10RBQ08334 325 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 CLCA4Q14CN2 919 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 TSNQ15631 228 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 NPTX1Q15818 432 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 ATAD3BQ5T9A4 648 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 LAIR2Q6ISS4 152 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 METTL2BQ6P1Q9 378 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 GPR149Q86SP6 731 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 DCP2Q8IU60 420 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 MICU2Q8IYU8 434 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 ANKRD53Q8N9V6 530 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 OR2T11Q8NH01 316 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 MCFD2Q8NI22 146 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 SLC13A3Q8WWT9 602 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 SMIM14Q96QK8 99 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 COQ7Q99807 217 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 SACM1LQ9NTJ5 587 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 NUDT4Q9NZJ9 180 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 OSGIN1Q9UJX0 560 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 EIF3LQ9Y262 564 aaKnown RBP7.16□□□□□ -1.26
BEST3-212ENST00000553096 MYOFQ9NZM1 2061 aa7.16□□□□□ -1.26
BEST3-212ENST00000553096 UBA6A0AVT1 1052 aaPredicted RBP7.15□□□□□ -1.26
BEST3-212ENST00000553096 BTN3A1O00481 513 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 COCHO43405 550 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 DYRK3O43781 588 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 RAMP2O60895 175 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 NDUFS3O75489 264 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 PRSS56P0CW18 603 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 PCSK2P16519 638 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 IGFBP5P24593 272 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 PSMB9P28065 219 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 SLC35A2P78381 396 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 PIGFQ07326 219 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 SELPLGQ14242 412 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 GALNT3Q14435 633 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 NR6A1Q15406 480 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 MAJINQ3KP22 176 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 ATG9BQ674R7 924 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 SLC8B1Q6J4K2 584 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 CAPN13Q6MZZ7 669 aaPredicted RBP7.15□□□□□ -1.26
BEST3-212ENST00000553096 SHQ1Q6PI26 577 aaKnown RBP7.15□□□□□ -1.26
BEST3-212ENST00000553096 PAQR3Q6TCH7 311 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 ENPP6Q6UWR7 440 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 DEFB128Q7Z7B8 93 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 GPSM1Q86YR5 675 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 MMAAQ8IVH4 418 aaKnown RBP7.15□□□□□ -1.26
BEST3-212ENST00000553096 OR7D4Q8NG98 312 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 ZHX1-C8orf76Q96EF9 292 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 TRIB3Q96RU7 358 aa7.15□□□□□ -1.26
BEST3-212ENST00000553096 DHRS9Q9BPW9 319 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms