RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 MKS1Q9NXB0 559 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 DHCR7Q9UBM7 475 aaKnown RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 SLC24A2Q9UI40 661 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 NOCTQ9UK39 431 aaKnown RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 POMT2Q9UKY4 750 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 RPL26L1Q9UNX3 145 aaKnown RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 WDR37Q9Y2I8 494 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 HEBP2Q9Y5Z4 205 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 MXRA5Q9NR99 2828 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 NCOA6Q14686 2063 aaPredicted RBP4.93□□□□□ -1.62
CKAP4-203ENST00000553039 NOTCH1P46531 2555 aa4.93□□□□□ -1.62
CKAP4-203ENST00000553039 ASPDHA6ND91 283 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 FADS2P1A8MWK0 482 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 C2orf74A8MZ97 194 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 RASGRF2O14827 1237 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 AURKAO14965 403 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 GSTA4O15217 222 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 CNOT3O75175 753 aaKnown RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 GNA14O95837 355 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 THBDP07204 575 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 SPTBP11277 2137 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 MTHFD1P11586 935 aaKnown RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 ST6GAL1P15907 406 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 RHCEP18577 417 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 TNFAIP3P21580 790 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 RFC1P35251 1148 aaPredicted RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 LMAN1P49257 510 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 TPI1P60174 286 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 POU4F1Q01851 419 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF33BQ06732 778 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 SLC10A7Q0GE19 358 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 TMEM115Q12893 351 aaPredicted RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 TERF2Q15554 542 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 SLC25A35Q3KQZ1 300 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 CHRFAM7AQ494W8 412 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 HENMT1Q5T8I9 393 aaKnown RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 MARC1Q5VT66 337 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 METRNLQ641Q3 311 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 HIBCHQ6NVY1 386 aaPredicted RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 LETMD1Q6P1Q0 360 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 PGM2L1Q6PCE3 622 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 CNSTQ6PJW8 725 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 CDHR3Q6ZTQ4 885 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 TRAPPC5Q8IUR0 188 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 CCDC71Q8IV32 467 aaPredicted RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 PPIL6Q8IXY8 311 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 CIARTQ8N365 385 aaPredicted RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 GDAP1Q8TB36 358 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 FAM172AQ8WUF8 416 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 UTP23Q9BRU9 249 aaKnown RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 TRIM51Q9BSJ1 452 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 CCM2Q9BSQ5 444 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 CNPY3Q9BT09 278 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 CRB3Q9BUF7 120 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 DEF6Q9H4E7 631 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 KIR3DX1Q9H7L2 352 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 LRTM1Q9HBL6 345 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 IMP3Q9NV31 184 aaKnown RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 RIC8BQ9NVN3 520 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 OXSMQ9NWU1 459 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 FBXO9Q9UK97 447 aaPredicted RBP4.92□□□□□ -1.62
CKAP4-203ENST00000553039 PCDHA7Q9UN72 937 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 PLCL2Q9UPR0 1127 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 ASB1Q9Y576 335 aa4.92□□□□□ -1.62
CKAP4-203ENST00000553039 C1orf232A0A0U1RR37 186 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 A0A1B0GX78 115 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 VSTM2BA6NLU5 285 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 A8MUI8 341 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 EEF2KO00418 725 aaKnown RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 TLX2O43763 284 aaPredicted RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 DEAF1O75398 565 aaPredicted RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 SLITRK5O94991 958 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 IL33O95760 270 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 LSM8O95777 96 aaKnown RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 GSNP06396 782 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 PDHA1P08559 390 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 KRT3P12035 628 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 SYT1P21579 422 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 UGT1A1P22309 533 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 UQCRC1P31930 480 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 CDH5P33151 784 aaPredicted RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF135P52742 658 aaPredicted RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 EMP2P54851 167 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 DLX5P56178 289 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 PMP22Q01453 160 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 TRAF2Q12933 501 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 STIM1Q13586 685 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 PTPRRQ15256 657 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 C15orf59Q2T9L4 293 aaPredicted RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 FLYWCH1Q4VC44 716 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF648Q5T619 568 aaPredicted RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 GPRC6AQ5T6X5 926 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 ATL3Q6DD88 541 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 SLC25A25Q6KCM7 469 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF449Q6P9G9 518 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 TTLL10Q6ZVT0 673 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 YTHDF3Q7Z739 585 aaKnown RBP4.91□□□□□ -1.62
CKAP4-203ENST00000553039 ZNF547Q8IVP9 402 aa4.91□□□□□ -1.62
CKAP4-203ENST00000553039 FAM20CQ8IXL6 584 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms