RNA–Protein interactions for RNA: ENST00000552879.5

LMBR1L-228, Transcript of limb development membrane protein 1 like, humanhuman

TSL 4

Gene LMBR1L, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1L-228ENST00000552879 SBSNQ6UWP8 590 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 RNF44Q7L0R7 432 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 RELL1Q8IUW5 271 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 OR4N4Q8N0Y3 316 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 SPATA6LQ8N4H0 392 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 RAB42Q8N4Z0 105 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 ZNF655Q8N720 491 aaPredicted RBP11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 CEP112Q8N8E3 955 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 MCOLN3Q8TDD5 553 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 IFT81Q8WYA0 676 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 CCDC138Q96M89 665 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 GBP5Q96PP8 586 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 GPR22Q99680 433 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 CPNE1Q99829 537 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 PLCD4Q9BRC7 762 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 DPH7Q9BTV6 452 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 ATG10Q9H0Y0 220 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 FANCEQ9HB96 536 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 SLC22A11Q9NSA0 550 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 STARD5Q9NSY2 213 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 CUEDC1Q9NWM3 386 aaPredicted RBP11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 NSMCE4AQ9NXX6 385 aa11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 DHCR7Q9UBM7 475 aaKnown RBP11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 SNRNP200O75643 2136 aaKnown RBP11.39□□□□□ -0.59
LMBR1L-228ENST00000552879 FAM208BQ5VWN6 2430 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 SPTBP11277 2137 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 ATXN7O15265 892 aaPredicted RBP11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 OR2B3O76000 313 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 CCNYL3P0C7X3 344 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 CMPK1P30085 196 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 RPA3P35244 121 aaPredicted RBP11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 CSRP3P50461 194 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 POU4F1Q01851 419 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 RHDQ02161 417 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 TSTA3Q13630 321 aaPredicted RBP11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 TBR1Q16650 682 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 GRTP1Q5TC63 336 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 FAM69BQ5VUD6 431 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 RHBDD2Q6NTF9 364 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 AGTRAPQ6RW13 159 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 FAM198BQ6UWH4 519 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 SYTL1Q8IYJ3 562 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 DTWD1Q8N5C7 304 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 NKAPQ8N5F7 415 aaKnown RBP11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 PPM1NQ8N819 430 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 EXD3Q8N9H8 876 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 STARD8Q92502 1023 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 CDKL2Q92772 493 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 EXTL1Q92935 676 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 MR1Q95460 341 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 KIAA1143Q96AT1 154 aaPredicted RBP11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 CLIP3Q96DZ5 547 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 UBL7Q96S82 380 aaPredicted RBP11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 SGPP1Q9BX95 441 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 FUT8Q9BYC5 575 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 UNKQ9C0B0 810 aaKnown RBP11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 SEMA4CQ9C0C4 833 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 CDC42EP4Q9H3Q1 356 aaKnown RBP11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 L2HGDHQ9H9P8 463 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 POPDC3Q9HBV1 291 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 MRPS30Q9NP92 439 aaKnown RBP11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 ABCF3Q9NUQ8 709 aa11.38□□□□□ -0.59
LMBR1L-228ENST00000552879 A0A0J9YVX5 310 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 FITM1A5D6W6 292 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 NPEPPSL1A6NEC2 478 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 ZNF839A8K0R7 811 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 ZNF891A8MT65 544 aaPredicted RBP11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 C21orf140B9A014 251 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 ZSCAN9O15535 394 aaPredicted RBP11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 PHGDHO43175 533 aaKnown RBP11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 MAP3K7O43318 606 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 CNOT3O75175 753 aaKnown RBP11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 KATNA1O75449 491 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 PRKAR1AP10644 381 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 NPPBP16860 134 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 PTPN4P29074 926 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 FOXL2P58012 376 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 VSX2P58304 361 aaPredicted RBP11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 TBPL1P62380 186 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 ABATP80404 500 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 DLG1Q12959 904 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 NAE1Q13564 534 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 USP10Q14694 798 aaKnown RBP11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 CRTC2Q53ET0 693 aaPredicted RBP11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 ZC3H12BQ5HYM0 836 aaKnown RBP11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 WASHC2DQ5SRD0 308 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 C1orf189Q5VU69 101 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 CMC1Q7Z7K0 106 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 PLD3Q8IV08 490 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 CTAGE3PQ8IX95 158 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 ARHGEF39Q8N4T4 335 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 OR56A3Q8NH54 315 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 ANKRD7Q92527 254 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 PYCR2Q96C36 320 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 FBXL8Q96CD0 374 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 OR2A5Q96R48 311 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 OR4K3Q96R72 315 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 EFHD1Q9BUP0 239 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 ACTL8Q9H568 366 aa11.37□□□□□ -0.59
LMBR1L-228ENST00000552879 INTS7Q9NVH2 962 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms