RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 GSX2Q9BZM3 304 aa8.25□□□□□ -1.09
PRKCH-203ENST00000552875 THAP2Q9H0W7 228 aa8.25□□□□□ -1.09
PRKCH-203ENST00000552875 DHX35Q9H5Z1 703 aaKnown RBP8.25□□□□□ -1.09
PRKCH-203ENST00000552875 MVB12BQ9H7P6 319 aa8.25□□□□□ -1.09
PRKCH-203ENST00000552875 KCNK13Q9HB14 408 aa8.25□□□□□ -1.09
PRKCH-203ENST00000552875 SPTLC3Q9NUV7 552 aa8.25□□□□□ -1.09
PRKCH-203ENST00000552875 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.25□□□□□ -1.09
PRKCH-203ENST00000552875 KLF13Q9Y2Y9 288 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-203ENST00000552875 TTLL3Q9Y4R7 772 aa8.25□□□□□ -1.09
PRKCH-203ENST00000552875 NOTCH1P46531 2555 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 LOC102723996A0A087X1L8 192 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 OR14I1A6ND48 311 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 GABRR3A8MPY1 467 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 NPIPA2E9PIF3 369 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 NPIPA3F8WFD2 350 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 CASKO14936 926 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 HS6ST1O60243 411 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 NEURL1O76050 574 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 PRLP01236 227 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 STATHP02808 62 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 POLBP06746 335 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 FBLP22087 321 aaKnown RBP8.24□□□□□ -1.09
PRKCH-203ENST00000552875 MMP8P22894 467 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 SHMT2P34897 504 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 CD86P42081 329 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 ZNF143P52747 638 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-203ENST00000552875 TAS2R50P59544 299 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 NOMO3P69849 1222 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 SORDQ00796 357 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 POU4F3Q15319 338 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 QPCTQ16769 361 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 EMC4Q5J8M3 183 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 WIPI1Q5MNZ9 446 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-203ENST00000552875 FNBP1LQ5T0N5 605 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 ZDHHC20Q5W0Z9 365 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 PLAG1Q6DJT9 500 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 H3F3CQ6NXT2 135 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 TMCO3Q6UWJ1 677 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 LRRC49Q8IUZ0 686 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 LGI4Q8N135 537 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.24□□□□□ -1.09
PRKCH-203ENST00000552875 MEIOBQ8N635 442 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 RASGEF1AQ8N9B8 481 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 TRIM44Q96DX7 344 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-203ENST00000552875 SRPK1Q96SB4 655 aaKnown RBP8.24□□□□□ -1.09
PRKCH-203ENST00000552875 CHP1Q99653 195 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 YIPF2Q9BWQ6 316 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 ZWILCHQ9H900 591 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 FAM8A1Q9UBU6 413 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 LPAR3Q9UBY5 353 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 NENFQ9UMX5 172 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 ZKSCAN5Q9Y2L8 839 aa8.24□□□□□ -1.09
PRKCH-203ENST00000552875 ANKRD12Q6UB98 2062 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 HRNRQ86YZ3 2850 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-203ENST00000552875 IGLV3-12A0A075B6K2 115 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 CCP110O43303 1012 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 KDM1AO60341 852 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 WDR1O75083 606 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 PDE9AO76083 593 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 C8orf89P0DMQ9 161 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 SKILP12757 684 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 NID1P14543 1247 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 TPH1P17752 444 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 MSH3P20585 1137 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 AKT1P31749 480 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 SERPINB6P35237 376 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 CYLC1P35663 651 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-203ENST00000552875 ARL4AP40617 200 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 HCAR3P49019 387 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 CYB561P49447 251 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 KLHL30Q0D2K2 578 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 DPYSQ14117 519 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 MESDQ14696 234 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 FBXL19-AS1Q494R0 122 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 ATP13A5Q4VNC0 1218 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 CMPK2Q5EBM0 449 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 PPP6R3Q5H9R7 873 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-203ENST00000552875 UBAP2Q5T6F2 1119 aaKnown RBP8.23□□□□□ -1.09
PRKCH-203ENST00000552875 ERMARDQ5T6L9 678 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 RIPPLY2Q5TAB7 128 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 FCRLBQ6BAA4 426 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 ALG1LQ6GMV1 187 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 ARHGEF18Q6ZSZ5 1173 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 TMC3Q7Z5M5 1100 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 LAPTM4BQ86VI4 370 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 CRLF3Q8IUI8 442 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 CFAP206Q8IYR0 622 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 TEX26Q8N6G2 289 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 ZNF653Q96CK0 615 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 IMMP1LQ96LU5 166 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 RMDN2Q96LZ7 410 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 OR2A14Q96R47 310 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 SH3GL2Q99962 352 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 HAUS4Q9H6D7 363 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 NHEJ1Q9H9Q4 299 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-203ENST00000552875 MAGEE1Q9HCI5 957 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 PNPLA3Q9NST1 481 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 INTS7Q9NVH2 962 aaKnown RBP8.23□□□□□ -1.09
PRKCH-203ENST00000552875 OR6C2Q9NZP2 312 aa8.23□□□□□ -1.09
PRKCH-203ENST00000552875 C19orf25Q9UFG5 118 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms