RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ZNF740Q8NDX6 193 aa19.04■□□□□ 0.64
SSH1-209ENST00000551165 OR7G3Q8NG95 312 aa19.04■□□□□ 0.64
SSH1-209ENST00000551165 TSACCQ96A04 125 aaPredicted RBP19.04■□□□□ 0.64
SSH1-209ENST00000551165 EGLN2Q96KS0 407 aa19.04■□□□□ 0.64
SSH1-209ENST00000551165 APOLD1Q96LR9 279 aa19.04■□□□□ 0.64
SSH1-209ENST00000551165 GUCD1Q96NT3 240 aa19.04■□□□□ 0.64
SSH1-209ENST00000551165 SERPINI1Q99574 410 aa19.04■□□□□ 0.64
SSH1-209ENST00000551165 LMAN1LQ9HAT1 526 aa19.04■□□□□ 0.64
SSH1-209ENST00000551165 IMP3Q9NV31 184 aaKnown RBP19.04■□□□□ 0.64
SSH1-209ENST00000551165 USP36Q9P275 1121 aaKnown RBP19.04■□□□□ 0.64
SSH1-209ENST00000551165 TMEM181Q9P2C4 612 aa19.04■□□□□ 0.64
SSH1-209ENST00000551165 CYP8B1Q9UNU6 501 aa19.04■□□□□ 0.64
SSH1-209ENST00000551165 PRSS38A1L453 326 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 MAGEB17A8MXT2 336 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 H0YIV9 168 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 EML2O95834 649 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 PCNAP12004 261 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 FOSL2P15408 326 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 KELP23276 732 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 ME2P23368 584 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 ZNF852Q6ZMS4 543 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 GCNT7Q6ZNI0 430 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 CCL4L1Q8NHW4 92 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 ASB12Q8WXK4 309 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 TIMM29Q9BSF4 260 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 EBPLQ9BY08 206 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 SPAG4Q9NPE6 437 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 CCDC177Q9NQR7 707 aaPredicted RBP19.03■□□□□ 0.64
SSH1-209ENST00000551165 PRDM6Q9NQX0 595 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 SCHIP1Q9P0W5 487 aaPredicted RBP19.03■□□□□ 0.64
SSH1-209ENST00000551165 KRBA1A5PL33 1030 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 EEDO75530 441 aaKnown RBP19.03■□□□□ 0.64
SSH1-209ENST00000551165 SEMA4FO95754 770 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 PSMB5P28074 263 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 PCDH1Q08174 1060 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 LEXMQ3ZCV2 418 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 HUS1BQ8NHY5 278 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 MAGEC3Q8TD91 643 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 SLC26A7Q8TE54 656 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 ROPN1LQ96C74 230 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 LRRC58Q96CX6 371 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 SCARF2Q96GP6 870 aaPredicted RBP19.03■□□□□ 0.64
SSH1-209ENST00000551165 FERD3LQ96RJ6 166 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 XKR8Q9H6D3 395 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 GEMIN8Q9NWZ8 242 aaKnown RBP19.03■□□□□ 0.64
SSH1-209ENST00000551165 ACSL5Q9ULC5 683 aa19.03■□□□□ 0.64
SSH1-209ENST00000551165 NME4O00746 187 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 FPGTO14772 594 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 AMD1P17707 334 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 HNRNPA2B1P22626 353 aaKnown RBP19.02■□□□□ 0.64
SSH1-209ENST00000551165 JAK1P23458 1154 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 AK4P27144 223 aaPredicted RBP19.02■□□□□ 0.64
SSH1-209ENST00000551165 HNF4AP41235 474 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 FZD5Q13467 585 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 NFYCQ13952 458 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 E2F2Q14209 437 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 SLBPQ14493 270 aaKnown RBP eCLIP19.02■□□□□ 0.64
SSH1-209ENST00000551165 RNF111Q6ZNA4 994 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 FAM160A2Q8N612 972 aaPredicted RBP19.02■□□□□ 0.64
SSH1-209ENST00000551165 DNAJB14Q8TBM8 379 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 RLN3Q8WXF3 142 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 TSSK3Q96PN8 268 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 HHIPQ96QV1 700 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 TACO1Q9BSH4 297 aaKnown RBP19.02■□□□□ 0.64
SSH1-209ENST00000551165 CD300AQ9UGN4 299 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 DUSP12Q9UNI6 340 aa19.02■□□□□ 0.64
SSH1-209ENST00000551165 PCM1Q15154 2024 aa19.02■□□□□ 0.63
SSH1-209ENST00000551165 LRRC72A6NJI9 287 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 ACOT8O14734 319 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 IGHV4-34P06331 123 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 SDC1P18827 310 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 SLC6A2P23975 617 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 IRX1P78414 480 aaPredicted RBP19.01■□□□□ 0.63
SSH1-209ENST00000551165 CACHD1Q5VU97 1274 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 SLC15A3Q8IY34 581 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 LINC01555Q8NAE3 123 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 NRG4Q8WWG1 115 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 CMTM7Q96FZ5 175 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 MSANTD3Q96H12 275 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 FOXQ1Q9C009 403 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 TRIT1Q9H3H1 467 aaKnown RBP19.01■□□□□ 0.63
SSH1-209ENST00000551165 RMI1Q9H9A7 625 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 SPATA6Q9NWH7 488 aaPredicted RBP19.01■□□□□ 0.63
SSH1-209ENST00000551165 CMTM6Q9NX76 183 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 GPRC5BQ9NZH0 403 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 DYRK1BQ9Y463 629 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 TRIM38O00635 465 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 DNAJA2O60884 412 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 B3GALT4O96024 378 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 C1GALT1C1LP0DN25 315 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 ERGP11308 486 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 CDH1P12830 882 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 PRPH2P23942 346 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 MAD2L1Q13257 205 aaPredicted RBP19.01■□□□□ 0.63
SSH1-209ENST00000551165 NFATC4Q14934 902 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 SMU1Q2TAY7 513 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 FAM174BQ3ZCQ3 159 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 RABL3Q5HYI8 236 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 SPANXN4Q5MJ08 99 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 PRAMEF14Q5SWL7 426 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms