RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 LOC100506127A0A0U1RQW1 187 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 LOC730098B7Z3J9 87 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 MATN4O95460 622 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 RHOP08100 348 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF12P17014 697 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 TACR1P25103 407 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 AKT1P31749 480 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 CD70P32970 193 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 HPCAL1P37235 193 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 STK19P49842 368 aaPredicted RBP10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ATP4BP51164 291 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 IFITM3Q01628 133 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 CDKN3Q16667 212 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ARHGAP15Q53QZ3 475 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 C6orf183Q5T699 404 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 CLIP4Q8N3C7 705 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 CHDHQ8NE62 594 aaPredicted RBP10.79□□□□□ -0.68
LINC00661-204ENST00000549354 SLC47A1Q96FL8 570 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 INPP5KQ9BT40 448 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ABCB10Q9NRK6 738 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 MRGBPQ9NV56 204 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 TBCCD1Q9NVR7 557 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ERVK-18Q9QC07 812 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 FBXO10Q9UK96 956 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 SPTBN5Q9NRC6 3674 aaKnown RBP10.79□□□□□ -0.68
LINC00661-204ENST00000549354 SYNDIG1LA6NDD5 238 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 OR2AG2A6NM03 316 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 EEDO75530 441 aaKnown RBP10.79□□□□□ -0.68
LINC00661-204ENST00000549354 UROSP10746 265 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 PTNP21246 168 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 POU1F1P28069 291 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 TTKP33981 857 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 RCVRNP35243 200 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ERVK-8P63133 956 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 TEAD2Q15562 447 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF77Q15935 545 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 SOWAHCQ53LP3 525 aaPredicted RBP10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ADNP2Q6IQ32 1131 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 DLEU7Q6UYE1 221 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 HEATR4Q86WZ0 1026 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 Q8N9G6 341 aaPredicted RBP10.79□□□□□ -0.68
LINC00661-204ENST00000549354 OR7A2PQ8NGA2 310 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 OR56A4Q8NGH8 313 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 MAL2Q969L2 176 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 NODALQ96S42 347 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 CLPBQ9H078 707 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 RUBCNLQ9H714 662 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 SYTL2Q9HCH5 934 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 TDP1Q9NUW8 608 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 MARK1Q9P0L2 795 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 IL17CQ9P0M4 197 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF232Q9UNY5 417 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 PPIL1Q9Y3C6 166 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF106Q9H2Y7 1883 aaKnown RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 GRM6O15303 877 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 RFPL2O75678 378 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ARHGEF15O94989 841 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 PRSS23O95084 383 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 SERPINA1P01009 418 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 RAP2AP10114 183 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 CDH1P12830 882 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 IRS1P35568 1242 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 GSTM4Q03013 218 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 RAPSNQ13702 412 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 INAQ16352 499 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ZCCHC8Q6NZY4 707 aaKnown RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ADCK1Q86TW2 530 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ZCCHC7Q8N3Z6 543 aaKnown RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF557Q8N988 423 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ADAMTS16Q8TE57 1224 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 RAB2BQ8WUD1 216 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 MED8Q96G25 268 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 SH3YL1Q96HL8 342 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 SAMD11Q96NU1 681 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 MTIF3Q9H2K0 278 aaKnown RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ACTL8Q9H568 366 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 TFB2MQ9H5Q4 396 aaKnown RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 PARVBQ9HBI1 364 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 RIC8BQ9NVN3 520 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ARL15Q9NXU5 204 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 MBD1Q9UIS9 605 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 VPS9D1Q9Y2B5 631 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 RECQL5O94762 991 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 STATHP02808 62 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 PTGER1P34995 402 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 HMGCLP35914 325 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 EMX2Q04743 252 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 DMC1Q14565 340 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 USP51Q70EK9 711 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 PAGE2Q7Z2X7 111 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 SERPINA9Q86WD7 417 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 PLPP6Q8IY26 295 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 C7orf61Q8IZ16 206 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ATG16L2Q8NAA4 619 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 MCOLN3Q8TDD5 553 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF707Q96C28 371 aaPredicted RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 OTUB2Q96DC9 234 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 FAM120BQ96EK7 910 aaKnown RBP10.78□□□□□ -0.68
LINC00661-204ENST00000549354 MYO19Q96H55 970 aa10.78□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF583Q96ND8 569 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms