RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ALOX12BO75342 701 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 UNC5CO95185 931 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 ONECUT2O95948 504 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 TPSB2P20231 275 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 MAGEA6P43360 314 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 GCGRP47871 477 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 NPY2RP49146 381 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 SESN2P58004 480 aaPredicted RBP11.67□□□□□ -0.54
DDX54-206ENST00000549271 BASP1P80723 227 aaKnown RBP11.67□□□□□ -0.54
DDX54-206ENST00000549271 SEMA3AQ14563 771 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 KCNJ11Q14654 390 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 KIR2DS3Q14952 304 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 TPSAB1Q15661 275 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 CYP1B1Q16678 543 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 AFTPHQ6ULP2 937 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 TRIM73Q86UV7 250 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 OR1N1Q8NGS0 311 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 OR6P1Q8NGX9 317 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 PEX13Q92968 403 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 PDLIM2Q96JY6 352 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 TREX2Q9BQ50 279 aaPredicted RBP11.67□□□□□ -0.54
DDX54-206ENST00000549271 LHPPQ9H008 270 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 SPRTNQ9H040 489 aaPredicted RBP11.67□□□□□ -0.54
DDX54-206ENST00000549271 TREX1Q9NSU2 369 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 TRMT1Q9NXH9 659 aaKnown RBP11.67□□□□□ -0.54
DDX54-206ENST00000549271 SPHK1Q9NYA1 384 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 IFT80Q9P2H3 777 aaPredicted RBP11.67□□□□□ -0.54
DDX54-206ENST00000549271 NDOR1Q9UHB4 597 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 PLCL2Q9UPR0 1127 aa11.67□□□□□ -0.54
DDX54-206ENST00000549271 FLNAP21333 2647 aaKnown RBP11.67□□□□□ -0.54
DDX54-206ENST00000549271 NSD1Q96L73 2696 aaPredicted RBP11.66□□□□□ -0.54
DDX54-206ENST00000549271 VPS13CQ709C8 3753 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 F8W8V4 182 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 SOCS6O14544 535 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 ZSCAN12O43309 604 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 CLDN14O95500 239 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 MMP11P24347 488 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 MGAT1P26572 445 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 NMBRP28336 390 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 COILP38432 576 aaPredicted RBP11.66□□□□□ -0.54
DDX54-206ENST00000549271 CDK16Q00536 496 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 MFAP5Q13361 173 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 NKAIN1Q4KMZ8 207 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 DNAJC21Q5F1R6 531 aaKnown RBP11.66□□□□□ -0.54
DDX54-206ENST00000549271 C1orf189Q5VU69 101 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 IRAK1BP1Q5VVH5 260 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 LRRC8BQ6P9F7 803 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 ISLR2Q6UXK2 745 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 NAPRTQ6XQN6 538 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 LDB1Q86U70 411 aaPredicted RBP11.66□□□□□ -0.54
DDX54-206ENST00000549271 PPHLN1Q8NEY8 458 aaKnown RBP11.66□□□□□ -0.54
DDX54-206ENST00000549271 NANOS1Q8WY41 292 aaKnown RBP11.66□□□□□ -0.54
DDX54-206ENST00000549271 ELMO1Q92556 727 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 MAGOHBQ96A72 148 aaKnown RBP11.66□□□□□ -0.54
DDX54-206ENST00000549271 MAGEB10Q96LZ2 347 aaPredicted RBP11.66□□□□□ -0.54
DDX54-206ENST00000549271 LMF1Q96S06 567 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 OSBPL9Q96SU4 736 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 KIFC1Q9BW19 673 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 IL22Q9GZX6 179 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 MARCH4Q9P2E8 410 aaPredicted RBP11.66□□□□□ -0.54
DDX54-206ENST00000549271 SH3BGRL2Q9UJC5 107 aa11.66□□□□□ -0.54
DDX54-206ENST00000549271 USP27XA6NNY8 438 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 AVILO75366 819 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 KLHL18O94889 574 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 KRT14P02533 472 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 ALBP02768 609 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 CTSBP07858 339 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 OR56A5P0C7T3 313 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 MST1P26927 711 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 ARNTP27540 789 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 PEBP1P30086 187 aaKnown RBP11.65□□□□□ -0.54
DDX54-206ENST00000549271 VPS41P49754 854 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 RAB28P51157 221 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 SMSP52788 366 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 TERF1P54274 439 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 PRAMEP78395 509 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 GPS1Q13098 491 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 SLC9A5Q14940 896 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 BRD3Q15059 726 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 DEFB110Q30KQ9 67 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 FASTKD1Q53R41 847 aaKnown RBP11.65□□□□□ -0.54
DDX54-206ENST00000549271 ANKRD22Q5VYY1 191 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 CES3Q6UWW8 571 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 LINC00696Q6ZRV3 163 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 CAND1Q86VP6 1230 aaKnown RBP11.65□□□□□ -0.54
DDX54-206ENST00000549271 TGIF2LYQ8IUE0 185 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 SLC22A15Q8IZD6 547 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 ZNF655Q8N720 491 aaPredicted RBP11.65□□□□□ -0.54
DDX54-206ENST00000549271 ACTRT1Q8TDG2 376 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 ADAMTS18Q8TE60 1221 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 DENND1AQ8TEH3 1009 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 FKBP10Q96AY3 582 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 NDC1Q9BTX1 674 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 SLC26A1Q9H2B4 701 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 CXXC4Q9H2H0 198 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 MRM3Q9HC36 420 aaKnown RBP11.65□□□□□ -0.54
DDX54-206ENST00000549271 SLC22A11Q9NSA0 550 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 TXLNGQ9NUQ3 528 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 SYBUQ9NX95 663 aa11.65□□□□□ -0.54
DDX54-206ENST00000549271 EURLQ9NYK6 297 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms