RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TRIM44Q96DX7 344 aaPredicted RBP15.13■□□□□ 0.01
DDX54-205ENST00000548786 LRFN5Q96NI6 719 aa15.13■□□□□ 0.01
DDX54-205ENST00000548786 CHRNA10Q9GZZ6 450 aa15.13■□□□□ 0.01
DDX54-205ENST00000548786 ATG10Q9H0Y0 220 aa15.13■□□□□ 0.01
DDX54-205ENST00000548786 IKZF3Q9UKT9 509 aa15.13■□□□□ 0.01
DDX54-205ENST00000548786 SNX7Q9UNH6 387 aa15.13■□□□□ 0.01
DDX54-205ENST00000548786 PCDHGA6Q9Y5G7 932 aa15.13■□□□□ 0.01
DDX54-205ENST00000548786 AP1M2Q9Y6Q5 423 aa15.13■□□□□ 0.01
DDX54-205ENST00000548786 LOC105369274A0A096LPK9 316 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 IGKV1-8A0A0C4DH67 115 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 LOC102723532A0A0G2JNH3 316 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 TCRBV9S1A1TA0A576 114 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 ZNF839A8K0R7 811 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 C9J4A7 227 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 EIF3FO00303 357 aaPredicted RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 TSPAN12O95859 305 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 STATHP02808 62 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 C8GP07360 202 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 CAPN1P07384 714 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 HBQ1P09105 142 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 AGXTP21549 392 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 GPX6P59796 221 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 TBPL1P62380 186 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 GUCY2DQ02846 1103 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 ZC3H12BQ5HYM0 836 aaKnown RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 ICE2Q659A1 982 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 ZNF385CQ66K41 422 aaPredicted RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 LRRC8EQ6NSJ5 796 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 RHBDD2Q6NTF9 364 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 TLDC1Q6P9B6 456 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 TMEM207Q6UWW9 146 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 ZNF517Q6ZMY9 492 aaPredicted RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 PLD3Q8IV08 490 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 OR4N4Q8N0Y3 316 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 NOA1Q8NC60 698 aaKnown RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 FBXO15Q8NCQ5 510 aaPredicted RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 LSM14AQ8ND56 463 aaKnown RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 MCOLN3Q8TDD5 553 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 ZUFSPQ96AP4 578 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 WBP1Q96G27 269 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 CATSPER2Q96P56 530 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 GBP5Q96PP8 586 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 GPR87Q9BY21 358 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 UNKQ9C0B0 810 aaKnown RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 CAB39LQ9H9S4 337 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 CUEDC1Q9NWM3 386 aaPredicted RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 UTP6Q9NYH9 597 aaKnown RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 CORO1CQ9ULV4 474 aaPredicted RBP15.12■□□□□ 0.01
DDX54-205ENST00000548786 MAN2B2Q9Y2E5 1009 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 FER1L5A0AVI2 2057 aa15.12■□□□□ 0.01
DDX54-205ENST00000548786 PABPN1LA6NDY0 278 aaKnown RBP15.11■□□□□ 0.01
DDX54-205ENST00000548786 NPEPPSL1A6NEC2 478 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 TARM1B6A8C7 271 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 EIF3HO15372 352 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDX54-205ENST00000548786 FKBP9O95302 570 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 GUCA1CO95843 209 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 HSD17B2P37059 387 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 MAGEA4P43358 317 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 TAS2R39P59534 338 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 CAV1Q03135 178 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 NFATC3Q12968 1075 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 CHAF1BQ13112 559 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 KCNAB2Q13303 367 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 NCF4Q15080 339 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 WASHC2DQ5SRD0 308 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 C3orf62Q6ZUJ4 267 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 SYVN1Q86TM6 617 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 SLC26A11Q86WA9 606 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 CEP97Q8IW35 865 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 TMEM151BQ8IW70 566 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 CTAGE3PQ8IX95 158 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.11■□□□□ 0.01
DDX54-205ENST00000548786 APOBEC4Q8WW27 367 aaKnown RBP15.11■□□□□ 0.01
DDX54-205ENST00000548786 VPS39Q96JC1 886 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 PLCD4Q9BRC7 762 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 NLNQ9BYT8 704 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 SYNPO2LQ9H987 977 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 PARVBQ9HBI1 364 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 CCDC177Q9NQR7 707 aaPredicted RBP15.11■□□□□ 0.01
DDX54-205ENST00000548786 CUTCQ9NTM9 273 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 ARL15Q9NXU5 204 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 IFT80Q9P2H3 777 aaPredicted RBP15.11■□□□□ 0.01
DDX54-205ENST00000548786 TXNDC16Q9P2K2 825 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 GPN3Q9UHW5 284 aaPredicted RBP15.11■□□□□ 0.01
DDX54-205ENST00000548786 TCFL5Q9UL49 500 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 SRPK3Q9UPE1 567 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 SH2B3Q9UQQ2 575 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 POLHQ9Y253 713 aa15.11■□□□□ 0.01
DDX54-205ENST00000548786 MTO1Q9Y2Z2 717 aaKnown RBP15.11■□□□□ 0.01
DDX54-205ENST00000548786 TLN1Q9Y490 2541 aaKnown RBP15.11■□□□□ 0.01
DDX54-205ENST00000548786 ANKRD12Q6UB98 2062 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 ZNF462Q96JM2 2506 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 OR2A25A4D2G3 310 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 HAT1O14929 419 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 DNAJB5O75953 348 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 CCNDBP1O95273 360 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 MED26O95402 600 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 DCDP81605 110 aaKnown RBP15.1■□□□□ 0.01
DDX54-205ENST00000548786 PRDX1Q06830 199 aaKnown RBP15.1■□□□□ 0.01
DDX54-205ENST00000548786 C19orf57Q0VDD7 668 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms