RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 PCDHB3Q9Y5E6 796 aa13.92□□□□□ -0.18
DDX54-203ENST00000546869 V9GYY5 206 aaPredicted RBP13.92□□□□□ -0.18
DDX54-203ENST00000546869 A0A087WV48 116 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 IQANK1A0A1B0GTG1 560 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 OR2A25A4D2G3 310 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 TRIM49D1C9J1S8 452 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 H3BMH7 237 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 STMND1H3BQB6 276 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 AGRPO00253 132 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 SRPX2O60687 465 aaPredicted RBP13.91□□□□□ -0.18
DDX54-203ENST00000546869 DLGAP3O95886 979 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 NUDT17P0C025 328 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 LIPCP11150 499 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 NPPBP16860 134 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 PSMB5P28074 263 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 HSD17B3P37058 310 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 TBPL1P62380 186 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 NAE1Q13564 534 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 GPR19Q15760 415 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 ZNF425Q6IV72 752 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 MBOAT1Q6ZNC8 495 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 TAX1BP1Q86VP1 789 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 LCA5Q86VQ0 697 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 GPSM1Q86YR5 675 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 SPATA6LQ8N4H0 392 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 MREGQ8N565 214 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 PPFIBP2Q8ND30 876 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 PTERQ96BW5 349 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 RHBDF1Q96CC6 855 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 NXNL1Q96CM4 212 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 ZNF285Q96NJ3 590 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 GPR78Q96P69 363 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 PLCD4Q9BRC7 762 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 HAUS8Q9BT25 410 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 ATG10Q9H0Y0 220 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 TMEM184CQ9NVA4 438 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 PSMC3IPQ9P2W1 217 aaPredicted RBP13.91□□□□□ -0.18
DDX54-203ENST00000546869 TAC3Q9UHF0 121 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 ACACBO00763 2458 aa13.91□□□□□ -0.18
DDX54-203ENST00000546869 IGKV1-8A0A0C4DH67 115 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 RRP8O43159 456 aaKnown RBP13.9□□□□□ -0.18
DDX54-203ENST00000546869 KERAO60938 352 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 RFPL1O75677 317 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 IPO13O94829 963 aaKnown RBP13.9□□□□□ -0.18
DDX54-203ENST00000546869 GUCA1CO95843 209 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 MT-ND3P03897 115 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 TFEBP19484 476 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 KCNC1P48547 511 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 OR4D1Q15615 310 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 PRAMEF13Q5VWM6 474 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 SULT1C3Q6IMI6 304 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 PWWP2BQ6NUJ5 590 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 FBXO42Q6P3S6 717 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 KLC3Q6P597 504 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 FRA10AC1Q70Z53 315 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 PAQR7Q86WK9 346 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 FAM20CQ8IXL6 584 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 PDPRQ8NCN5 879 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 OR1L3Q8NH93 324 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 ACMSDQ8TDX5 336 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 LRFN5Q96NI6 719 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 ATOH8Q96SQ7 321 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 DPH7Q9BTV6 452 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 ACAT2Q9BWD1 397 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 FAM117AQ9C073 453 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 KLHL25Q9H0H3 589 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 EURLQ9NYK6 297 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 PTBP2Q9UKA9 531 aaKnown RBP13.9□□□□□ -0.18
DDX54-203ENST00000546869 ZMIZ1Q9ULJ6 1067 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 AP1M2Q9Y6Q5 423 aa13.9□□□□□ -0.18
DDX54-203ENST00000546869 SYCE1LA8MT33 242 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 TMEM150CB9EJG8 249 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 STK17BO94768 372 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 SHBGP04278 402 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 HBQ1P09105 142 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 RBP1P09455 135 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 EZRP15311 586 aaKnown RBP13.89□□□□□ -0.19
DDX54-203ENST00000546869 SLC6A12P48065 614 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 ITGA1P56199 1179 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 IRF9Q00978 393 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 TSNAXIP1Q2TAA8 658 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 PTCHD3Q3KNS1 767 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 TCTE1Q5JU00 501 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 THEMIS2Q5TEJ8 643 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 TLDC1Q6P9B6 456 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 RNF44Q7L0R7 432 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 ZFAND4Q86XD8 727 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 MCATQ8IVS2 390 aaKnown RBP13.89□□□□□ -0.19
DDX54-203ENST00000546869 ABHD11Q8NFV4 315 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 OR4K1Q8NGD4 311 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 MZB1Q8WU39 189 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 KCTD4Q8WVF5 259 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 KCNE4Q8WWG9 221 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 MED8Q96G25 268 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 EGFL8Q99944 293 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 SARGQ9BW04 601 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 CAPS2Q9BXY5 557 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 ULBP3Q9BZM4 244 aa13.89□□□□□ -0.19
DDX54-203ENST00000546869 ROPN1BQ9BZX4 212 aaPredicted RBP13.89□□□□□ -0.19
DDX54-203ENST00000546869 CNOT10Q9H9A5 744 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms