RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 WDFY3Q8IZQ1 3526 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 ZNF106Q9H2Y7 1883 aaKnown RBP8.96□□□□□ -0.98
YBX3-218ENST00000546298 CFAP46Q8IYW2 2715 aa8.96□□□□□ -0.98
YBX3-218ENST00000546298 CLEC18AA5D8T8 446 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 EIF3FO00303 357 aaPredicted RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 CES2O00748 559 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 TXNDC9O14530 226 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 ZBTB14O43829 449 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 EIF2S1P05198 315 aaKnown RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 ERGP11308 486 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 PGAM1P18669 254 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 MCM3P25205 808 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 ITGA3P26006 1051 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 PSMB5P28074 263 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 SKIV2L2P42285 1042 aaKnown RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 MAGEA3P43357 314 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 OR1D4P47884 311 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 CLCN7P51798 805 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 PNLIPRP1P54315 467 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 RELAQ04206 551 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 PRDX1Q06830 199 aaKnown RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 CTBP1Q13363 440 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 RAPSNQ13702 412 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 PTK6Q13882 451 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 FASTKQ14296 549 aaKnown RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 RBBP7Q16576 425 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 FHL5Q5TD97 284 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 SLC6A19Q695T7 634 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 FBXO42Q6P3S6 717 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 CLEC18BQ6UXF7 455 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 RNF44Q7L0R7 432 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 PCGF5Q86SE9 256 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 DENND6AQ8IWF6 608 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 REXO1L1PQ8IX06 675 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 IQCKQ8N0W5 287 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 SLC35F6Q8N357 371 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 RBMXL3Q8N7X1 1067 aaKnown RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 NAT8LQ8N9F0 302 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
YBX3-218ENST00000546298 CLEC18CQ8NCF0 446 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 COG1Q8WTW3 980 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 ASB11Q8WXH4 323 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 RERGQ96A58 199 aaPredicted RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 SIGLEC10Q96LC7 697 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 PKP4Q99569 1192 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 EBNA1BP2Q99848 306 aaKnown RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 PLCD4Q9BRC7 762 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 NAT9Q9BTE0 207 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 ACAT2Q9BWD1 397 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 ZNF552Q9H707 407 aaPredicted RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 FBXO6Q9NRD1 293 aaPredicted RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 GALPQ9UBC7 116 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 ZNF282Q9UDV7 671 aaPredicted RBP8.95□□□□□ -0.98
YBX3-218ENST00000546298 FBXL4Q9UKA2 621 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 DHRS7Q9Y394 339 aa8.95□□□□□ -0.98
YBX3-218ENST00000546298 GCN1Q92616 2671 aaKnown RBP8.94□□□□□ -0.98
YBX3-218ENST00000546298 LOC105369274A0A096LPK9 316 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 LOC102723532A0A0G2JNH3 316 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 VSTM2BA6NLU5 285 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 E7ENX8 843 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 H0YGG7 62 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 TTC4O95801 387 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 SYF2O95926 243 aaKnown RBP8.94□□□□□ -0.98
YBX3-218ENST00000546298 TCP1P17987 556 aaKnown RBP8.94□□□□□ -0.98
YBX3-218ENST00000546298 HRH2P25021 359 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 SLC1A2P43004 574 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 RGS4P49798 205 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 ARF3P61204 181 aaPredicted RBP8.94□□□□□ -0.98
YBX3-218ENST00000546298 TAP2Q03519 686 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 PRTGQ2VWP7 1150 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 TUBB8Q3ZCM7 444 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 THEMIS2Q5TEJ8 643 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 AGAP7PQ5VUJ5 663 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 GARNL3Q5VVW2 1013 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 PRAMEF13Q5VWM6 474 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 ICE2Q659A1 982 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 FRMPD2BQ6IN97 320 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 SUSD1Q6UWL2 747 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 KCNMB4Q86W47 210 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 PAQR7Q86WK9 346 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 PALM2Q8IXS6 379 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 OR4N4Q8N0Y3 316 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 CSNK1A1LQ8N752 337 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 MCOLN3Q8TDD5 553 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.94□□□□□ -0.98
YBX3-218ENST00000546298 MIEF2Q96C03 454 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 MVB12AQ96EY5 273 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 CABS1Q96KC9 395 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 AGAP4Q96P64 663 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 SPSB2Q99619 263 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 GPR21Q99679 349 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 TRIM56Q9BRZ2 755 aaKnown RBP8.94□□□□□ -0.98
YBX3-218ENST00000546298 CRB3Q9BUF7 120 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 ILKAPQ9H0C8 392 aaPredicted RBP8.94□□□□□ -0.98
YBX3-218ENST00000546298 PCBD2Q9H0N5 130 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 SOX17Q9H6I2 414 aaPredicted RBP8.94□□□□□ -0.98
YBX3-218ENST00000546298 MAP10Q9P2G4 905 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 ASIC3Q9UHC3 531 aa8.94□□□□□ -0.98
YBX3-218ENST00000546298 TAC3Q9UHF0 121 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms