RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 KIAA0754O94854 1291 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 TUBBP07437 444 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 NCF1P14598 390 aaPredicted RBP16.17■□□□□ 0.18
LTBR-215ENST00000546296 EIF2S3P41091 472 aaKnown RBP16.17■□□□□ 0.18
LTBR-215ENST00000546296 HNMTP50135 292 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 YBX1P67809 324 aaKnown RBP16.17■□□□□ 0.18
LTBR-215ENST00000546296 CDKL1Q00532 357 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 IRF9Q00978 393 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 DLG1Q12959 904 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 OR4D1Q15615 310 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 DEFB110Q30KQ9 67 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 ZC3H12BQ5HYM0 836 aaKnown RBP16.17■□□□□ 0.18
LTBR-215ENST00000546296 PWWP2BQ6NUJ5 590 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 KLC3Q6P597 504 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 EMBQ6PCB8 327 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 ADGRD1Q6QNK2 874 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 ADCK2Q7Z695 626 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 TMEM126BQ8IUX1 230 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 MCATQ8IVS2 390 aaKnown RBP16.17■□□□□ 0.18
LTBR-215ENST00000546296 GPR135Q8IZ08 494 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 OR1L3Q8NH93 324 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 STAG3L4Q8TBR4 150 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 KCTD4Q8WVF5 259 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 EXT2Q93063 718 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 PYCR2Q96C36 320 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 NXNL1Q96CM4 212 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 MTBPQ96DY7 904 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 FCRL4Q96PJ5 515 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 DHRS4Q9BTZ2 278 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 DPH1Q9BZG8 443 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 SLC7A5P2Q9GIP4 190 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 IGSF5Q9NSI5 407 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 CD274Q9NZQ7 290 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 PSMC3IPQ9P2W1 217 aaPredicted RBP16.17■□□□□ 0.18
LTBR-215ENST00000546296 FETUBQ9UGM5 382 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 SNX7Q9UNH6 387 aa16.17■□□□□ 0.18
LTBR-215ENST00000546296 FREM2Q5SZK8 3169 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 SCRG1O75711 98 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 KLHL2O95198 593 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 SHBGP04278 402 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 MSL3P1P0C860 447 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 LIPCP11150 499 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 GCAP28676 217 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 HSD17B3P37058 310 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 ITGA1P56199 1179 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 TGFBIQ15582 683 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 C17orf64Q86WR6 236 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 OR56A3Q8NH54 315 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 AENQ8WTP8 325 aaKnown RBP16.16■□□□□ 0.18
LTBR-215ENST00000546296 PTERQ96BW5 349 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 TSNARE1Q96NA8 513 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 HAUS8Q9BT25 410 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 SGPP1Q9BX95 441 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 SLC6A20Q9NP91 592 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 EURLQ9NYK6 297 aa16.16■□□□□ 0.18
LTBR-215ENST00000546296 ASPMQ8IZT6 3477 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 SMIM23A6NLE4 172 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 SRRM3A6NNA2 597 aaPredicted RBP16.15■□□□□ 0.18
LTBR-215ENST00000546296 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.15■□□□□ 0.18
LTBR-215ENST00000546296 E7EQ34 232 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 RAD1O60671 282 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 OR2B3O76000 313 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 TIAF1O95411 115 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 NTRK1P04629 796 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 CCNYL3P0C7X3 344 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 ZNF28P17035 718 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 HRH2P25021 359 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 GLRBP48167 497 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 ATP1A2P50993 1020 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 NAA30Q147X3 362 aaPredicted RBP16.15■□□□□ 0.18
LTBR-215ENST00000546296 TGIF1Q15583 401 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 BROXQ5VW32 411 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 C6orf15Q6UXA7 325 aaPredicted RBP16.15■□□□□ 0.18
LTBR-215ENST00000546296 ISCA2Q86U28 154 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 CACNA2D3Q8IZS8 1091 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 CENPLQ8N0S6 344 aaPredicted RBP16.15■□□□□ 0.18
LTBR-215ENST00000546296 CNPY4Q8N129 248 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 TCAIMQ8N3R3 496 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 GALNT6Q8NCL4 622 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 CAVIN3Q969G5 261 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 SELENOSQ9BQE4 189 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 PLCD4Q9BRC7 762 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 SPRTNQ9H040 489 aaPredicted RBP16.15■□□□□ 0.18
LTBR-215ENST00000546296 PPCSQ9HAB8 311 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 ANKMY1Q9P2S6 941 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 TBK1Q9UHD2 729 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 PILRAQ9UKJ1 303 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 DYRK1BQ9Y463 629 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 KLK4Q9Y5K2 254 aa16.15■□□□□ 0.18
LTBR-215ENST00000546296 TPRP12270 2363 aaKnown RBP16.14■□□□□ 0.17
LTBR-215ENST00000546296 A0A0J9YVX5 310 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 SYCE1LA8MT33 242 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 SUPT3HB4E1H0 165 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 H7BY64 318 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 HCRTR1O43613 425 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 SUPT3HO75486 399 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 NPPBP16860 134 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 SLCO1A2P46721 670 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 KCNC1P48547 511 aa16.14■□□□□ 0.17
LTBR-215ENST00000546296 CSRP3P50461 194 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms