RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 RBM15BQ8NDT2 890 aaKnown RBP7.64□□□□□ -1.19
VPS13D-211ENST00000543710 C1orf74Q96LT6 269 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 NSMCE3Q96MG7 304 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 DPAGT1Q9H3H5 408 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 RAI2Q9Y5P3 530 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 EDDM13A0A1B0GTR0 161 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF670-ZNF695F2Z2N8 137 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 RLN2P04090 185 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 GIMD1P0DJR0 217 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 MAGEA11P43364 429 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 DUSP4Q13115 394 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 ATP6AP1Q15904 470 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 SEZ6Q53EL9 994 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 PLEKHG4Q58EX7 1191 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF773Q6PK81 442 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 FIP1L1Q6UN15 594 aaKnown RBP7.64□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF548Q8NEK5 533 aaPredicted RBP7.64□□□□□ -1.19
VPS13D-211ENST00000543710 TMEM174Q8WUU8 243 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 KCTD7Q96MP8 289 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 MAP3K3Q99759 626 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 DPYSL5Q9BPU6 564 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 ACTL8Q9H568 366 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 SIX2Q9NPC8 291 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 ABCB10Q9NRK6 738 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 ADAMTS5Q9UNA0 930 aa7.64□□□□□ -1.19
VPS13D-211ENST00000543710 CAPN5O15484 640 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 PI15O43692 258 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ATF6P18850 670 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 COL9A1P20849 921 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 MPSTP25325 297 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 FOXD4Q12950 439 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 POM121L1PQ3SYA9 428 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 CDKL4Q5MAI5 379 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 PLEKHS1Q5SXH7 462 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ATG9BQ674R7 924 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 PELOQ9BRX2 385 aaKnown RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 CDADC1Q9BWV3 514 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 PCDH12Q9NPG4 1184 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 MKKSQ9NPJ1 570 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 TDP1Q9NUW8 608 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ZDHHC3Q9NYG2 299 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 SLC17A7Q9P2U7 560 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 SEC14L3Q9UDX4 400 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 UBR2Q8IWV8 1755 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 DISC1C4P0D8 188 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 MKRN2OSH3BPM6 223 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 LILRB3O75022 631 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 NOS1APO75052 506 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 RCBTB2O95199 551 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 EBLN1P0CF75 366 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 DBTP11182 482 aaKnown RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 CHRNB2P17787 502 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ACVR2AP27037 513 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ACTC1P68032 377 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ACTA1P68133 377 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 RASGEF1BQ0VAM2 473 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ZMYND11Q15326 602 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 TRIM61Q5EBN2 209 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 FAM171BQ6P995 826 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 RSPO2Q6UXX9 243 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 RBMS3Q6XE24 437 aaKnown RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF227Q86WZ6 799 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 DENND1CQ8IV53 801 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ZNF614Q8N883 585 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 FAM47BQ8NA70 645 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 LPGAT1Q92604 370 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 FRMD6Q96NE9 622 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 CST11Q9H112 138 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 NELFAQ9H3P2 528 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 GDAP2Q9NXN4 497 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 OR10H1Q9Y4A9 318 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 A0A1B0GTW7 788 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 A0A1W2PQH9 124 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 KANTRA0A1W2PQU2 76 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 RCCD1A6NED2 376 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 K7EPI3 171 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 GRID2O43424 1007 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 BCAS2O75934 225 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 GSRP00390 522 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 AK1P00568 194 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 IRS1P35568 1242 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 SLC1A2P43004 574 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 BDH1Q02338 343 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 FSTL5Q8N475 847 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 EFHD2Q96C19 240 aaPredicted RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 COL21A1Q96P44 957 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 NPAS2Q99743 824 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 SLC39A3Q9BRY0 314 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 AARSD1Q9BTE6 412 aaKnown RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 NDC1Q9BTX1 674 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 CADM1Q9BY67 442 aaKnown RBP7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ADAM7Q9H2U9 754 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 TMEM138Q9NPI0 162 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 IFT52Q9Y366 437 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 KCNU1A8MYU2 1149 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 TLR5O60602 858 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ABOP16442 354 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 CCR8P51685 355 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 ACTR1AP61163 376 aa7.63□□□□□ -1.19
VPS13D-211ENST00000543710 RPS14P62263 151 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms