RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TFF2Q03403 129 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 TBL3Q12788 808 aaKnown RBP9.03□□□□□ -0.96
GNE-206ENST00000543356 ART3Q13508 389 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 LRP8Q14114 963 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 RCAN2Q14206 197 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 GAS6Q14393 721 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 TMEM31Q5JXX7 168 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 C10orf62Q5T681 223 aaPredicted RBP9.03□□□□□ -0.96
GNE-206ENST00000543356 ANO7Q6IWH7 933 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 PGM2L1Q6PCE3 622 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 BLOC1S3Q6QNY0 202 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 LCTLQ6UWM7 567 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 SLCO4C1Q6ZQN7 724 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 NET1Q7Z628 596 aaPredicted RBP9.03□□□□□ -0.96
GNE-206ENST00000543356 RGL4Q8IZJ4 473 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 WDR20Q8TBZ3 569 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 NELL2Q99435 816 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 NPAS2Q99743 824 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 MENTQ9BUN1 341 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 DENND2DQ9H6A0 471 aaPredicted RBP9.03□□□□□ -0.96
GNE-206ENST00000543356 LRTM1Q9HBL6 345 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 C1orf109Q9NX04 203 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 CYP8B1Q9UNU6 501 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 KCNK6Q9Y257 313 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 EIF3LQ9Y262 564 aaKnown RBP9.03□□□□□ -0.96
GNE-206ENST00000543356 GPSM3Q9Y4H4 160 aa9.03□□□□□ -0.96
GNE-206ENST00000543356 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.03□□□□□ -0.96
GNE-206ENST00000543356 F5P12259 2224 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 PRAMEF26H0Y7S4 382 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 NR5A2O00482 541 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 ZNF217O75362 1048 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 SLC22A3O75751 556 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 CIB2O75838 187 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 HSD3B1P14060 373 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 NPPBP16860 134 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 HSD3B2P26439 372 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 ZFP36L2P47974 494 aaKnown RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 RPL38P63173 70 aaKnown RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 UBXN2BQ14CS0 331 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 RFTN2Q52LD8 501 aaPredicted RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 SGO1Q5FBB7 561 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 ATG9BQ674R7 924 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 LPCAT2Q7L5N7 544 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 ABI3BPQ7Z7G0 1075 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 MIPOL1Q8TD10 442 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 OR1E3Q8WZA6 343 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 NEIL2Q969S2 332 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 ROPN1LQ96C74 230 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 DTNBP1Q96EV8 351 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 TOE1Q96GM8 510 aaKnown RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 DHRS1Q96LJ7 313 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 INSM2Q96T92 566 aaPredicted RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 HAUS8Q9BT25 410 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 OSGEPL1Q9H4B0 414 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 C6orf106Q9H6K1 298 aaPredicted RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 CARS2Q9HA77 564 aaKnown RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 SLC52A3Q9NQ40 469 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 WSB2Q9NYS7 404 aaPredicted RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 SLC7A8Q9UHI5 535 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 FBXL21Q9UKT6 434 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 WDR37Q9Y2I8 494 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 NDUFAF1Q9Y375 327 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 POLR3HQ9Y535 204 aaPredicted RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 DYTNA2CJ06 578 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 FAM234BA2RU67 622 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 MRASO14807 208 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 SLC2A4P14672 509 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 JAK1P23458 1154 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 RPL10P27635 214 aaKnown RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 CD6P30203 668 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 RABIFP47224 123 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 MTTPP55157 894 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 POLE2P56282 527 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 NME5P56597 212 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 HMGCS1Q01581 520 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 TRMT5Q32P41 509 aaKnown RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 UAP1L1Q3KQV9 507 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 MMEL1Q495T6 779 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 PRAMEF14Q5SWL7 426 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 IL23RQ5VWK5 629 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 PRAMEF13Q5VWM6 474 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 C8orf82Q6P1X6 216 aaPredicted RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 CYP20A1Q6UW02 462 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 ENPP7Q6UWV6 458 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 BNC2Q6ZN30 1099 aaPredicted RBP9.02□□□□□ -0.97
GNE-206ENST00000543356 RAB42Q8N4Z0 105 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 PCYOX1LQ8NBM8 494 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 SLC5A11Q8WWX8 675 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 REPS1Q96D71 796 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 CMTM7Q96FZ5 175 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 PDXPQ96GD0 296 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 CLPTM1LQ96KA5 538 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 FCRL1Q96LA6 429 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 C12orf66Q96MD2 445 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 HHIPQ96QV1 700 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 EFCAB11Q9BUY7 163 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 RAB11FIP5Q9BXF6 653 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 MVB12BQ9H7P6 319 aa9.02□□□□□ -0.97
GNE-206ENST00000543356 WDR41Q9HAD4 459 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms