RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 KLHL42Q9P2K6 505 aa12.55□□□□□ -0.4
RTN3-212ENST00000543123 CTSFQ9UBX1 484 aa12.55□□□□□ -0.4
RTN3-212ENST00000543123 ZNF282Q9UDV7 671 aaPredicted RBP12.55□□□□□ -0.4
RTN3-212ENST00000543123 CRYL1Q9Y2S2 319 aa12.55□□□□□ -0.4
RTN3-212ENST00000543123 NUP210LQ5VU65 1888 aa12.55□□□□□ -0.4
RTN3-212ENST00000543123 A0A0J9YVX5 310 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 FAM237BA0A1B0GVD1 139 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 OR2A25A4D2G3 310 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 CTAGE9A4FU28 777 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 SDR42E2A6NKP2 422 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 CYSRT1A8MQ03 144 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 TCP11X1B4DZS4 312 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 GOLGA8KD6RF30 607 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 GOLGA8TH3BQL2 631 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 PCDH17O14917 1159 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 PSIP1O75475 530 aaKnown RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 USP1O94782 785 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 DDAH2O95865 285 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 EIF2S1P05198 315 aaKnown RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 ERGP11308 486 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 ENO3P13929 434 aaPredicted RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 FBLP22087 321 aaKnown RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 ELOAQ14241 798 aaKnown RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 ESPL1Q14674 2120 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 TRIP13Q15645 432 aaPredicted RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 KLHL38Q2WGJ6 581 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 PLEKHN1Q494U1 663 aaPredicted RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 CCSMST1Q4G0I0 132 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 PRR30Q53SZ7 412 aaPredicted RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 COX15Q7KZN9 410 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 LRRC8AQ8IWT6 810 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 GABPB2Q8TAK5 448 aaPredicted RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 CALML6Q8TD86 181 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 PPP4R1Q8TF05 950 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 RERGQ96A58 199 aaPredicted RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 MAGOHBQ96A72 148 aaKnown RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 ZNF669Q96BR6 464 aaPredicted RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 FAM136AQ96C01 138 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 MVB12AQ96EY5 273 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 PBKQ96KB5 322 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 CABS1Q96KC9 395 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 WDR77Q9BQA1 342 aaPredicted RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 DPH7Q9BTV6 452 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 ACAT2Q9BWD1 397 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 LHPPQ9H008 270 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 SOX17Q9H6I2 414 aaPredicted RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 EPS8L2Q9H6S3 715 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 MRPS30Q9NP92 439 aaKnown RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 AGPAT4Q9NRZ5 378 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 ZC3H7BQ9UGR2 993 aaKnown RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 TSR3Q9UJK0 312 aaKnown RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 JRKLQ9Y4A0 524 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 HS3ST3B1Q9Y662 390 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 COPG1Q9Y678 874 aaKnown RBP12.54□□□□□ -0.4
RTN3-212ENST00000543123 COMMD10Q9Y6G5 202 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 PCSK5Q92824 1860 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 SHANK1Q9Y566 2161 aa12.54□□□□□ -0.4
RTN3-212ENST00000543123 ANKRD12Q6UB98 2062 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 NBPF19A0A087WUL8 3843 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 TCRBV7S3A2A0A539 114 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 ARHGEF33A8MVX0 844 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 TXNDC9O14530 226 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 SOCS6O14544 535 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 MAP2K7O14733 419 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 KRT14P02533 472 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 ACPPP15309 386 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 EZRP15311 586 aaKnown RBP12.53□□□□□ -0.4
RTN3-212ENST00000543123 OR1D4P47884 311 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 TERF1P54274 439 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 PNLIPRP1P54315 467 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 ABATP80404 500 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 TSTA3Q13630 321 aaPredicted RBP12.53□□□□□ -0.4
RTN3-212ENST00000543123 ACSBG2Q5FVE4 666 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 FRMPD2BQ6IN97 320 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 KIRREL2Q6UWL6 708 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 Q6ZS92 163 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 METTL27Q8N6F8 245 aaPredicted RBP12.53□□□□□ -0.4
RTN3-212ENST00000543123 FBXO15Q8NCQ5 510 aaPredicted RBP12.53□□□□□ -0.4
RTN3-212ENST00000543123 MCUQ8NE86 351 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 GRK7Q8WTQ7 553 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 KCNJ9Q92806 393 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 MIEF2Q96C03 454 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 SNRNP40Q96DI7 357 aaKnown RBP12.53□□□□□ -0.4
RTN3-212ENST00000543123 EBNA1BP2Q99848 306 aaKnown RBP12.53□□□□□ -0.4
RTN3-212ENST00000543123 PLCD4Q9BRC7 762 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 C14orf105Q9NVL8 296 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 PPP2R2CQ9Y2T4 447 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 MAU2Q9Y6X3 613 aa12.53□□□□□ -0.4
RTN3-212ENST00000543123 GOLGA6L10A0A0M3HER8 536 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 A0A1W2PPV9 198 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 PGRMC1O00264 195 aaKnown RBP12.52□□□□□ -0.41
RTN3-212ENST00000543123 EIF3FO00303 357 aaPredicted RBP12.52□□□□□ -0.41
RTN3-212ENST00000543123 AVILO75366 819 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 HPP00738 406 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 ANXA5P08758 320 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 ZGLP1P0C6A0 271 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 FDXRP22570 491 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 FOXL2P58012 376 aa12.52□□□□□ -0.41
RTN3-212ENST00000543123 AP2B1P63010 937 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms