RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ANKS6Q68DC2 871 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 LETMD1Q6P1Q0 360 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 AHSA2Q719I0 299 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 ZNF683Q8IZ20 524 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 BEND7Q8N7W2 519 aaPredicted RBP8.9□□□□□ -0.98
THBS3-211ENST00000541990 ZNF540Q8NDQ6 660 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 FBLIM1Q8WUP2 373 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 NCLNQ969V3 563 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 SPATA17Q96L03 361 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 FBXL12Q9NXK8 326 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 CFAP97Q9P2B7 532 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 PCTPQ9UKL6 214 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 NOTCH4Q99466 2003 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 KNL1Q8NG31 2342 aa8.9□□□□□ -0.98
THBS3-211ENST00000541990 WDFY4Q6ZS81 3184 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 AGAP5A6NIR3 686 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 PRAMEF12O95522 483 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 GLUD1P00367 558 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 FMO4P31512 558 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 NRIP1P48552 1158 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 TRPC1P48995 793 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 CDKN1CP49918 316 aaPredicted RBP8.9□□□□□ -0.99
THBS3-211ENST00000541990 NDUFA5Q16718 116 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 SPATS1Q496A3 300 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 CCDC58Q4VC31 144 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 RFTN2Q52LD8 501 aaPredicted RBP8.9□□□□□ -0.99
THBS3-211ENST00000541990 ATAD3CQ5T2N8 411 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 CYP20A1Q6UW02 462 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 Q6ZPB1 254 aaPredicted RBP8.9□□□□□ -0.99
THBS3-211ENST00000541990 CCDC117Q8IWD4 279 aaPredicted RBP8.9□□□□□ -0.99
THBS3-211ENST00000541990 PGBD5Q8N414 524 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 PARP16Q8N5Y8 322 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 DPP10Q8N608 796 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 CLP1Q92989 425 aaKnown RBP8.9□□□□□ -0.99
THBS3-211ENST00000541990 FUBP1Q96AE4 644 aaKnown RBP8.9□□□□□ -0.99
THBS3-211ENST00000541990 ZYG11BQ9C0D3 744 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 DUSP21Q9H596 190 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 ATP13A1Q9HD20 1204 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 AMBNQ9NP70 447 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 C14orf119Q9NWQ9 140 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 UXTQ9UBK9 157 aaPredicted RBP8.9□□□□□ -0.99
THBS3-211ENST00000541990 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.9□□□□□ -0.99
THBS3-211ENST00000541990 C3orf18Q9UK00 162 aa8.9□□□□□ -0.99
THBS3-211ENST00000541990 MROH6A6NGR9 719 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 BTN3A1O00481 513 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 CXCR6O00574 342 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 ANKRD28O15084 1053 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 SLC7A4O43246 635 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 KERAO60938 352 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 ATXN1LP0C7T5 689 aaKnown RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 GADD45AP24522 165 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 IGFBP5P24593 272 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 DAPP51397 102 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 TOP3AQ13472 1001 aaPredicted RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 SNAP47Q5SQN1 464 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 LRRC49Q8IUZ0 686 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 SVOPQ8N4V2 548 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 RTL3Q8N8U3 475 aaKnown RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 CLHC1Q8NHS4 586 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 NETO1Q8TDF5 533 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 TSPEARQ8WU66 669 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 TM6SF2Q9BZW4 377 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 KAT8Q9H7Z6 458 aaKnown RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 ZIM2Q9NZV7 527 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 ABCG2Q9UNQ0 655 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 PCDHGB1Q9Y5G3 927 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 A0A096LPI6 279 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 OR2A25A4D2G3 310 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 F5H5T6 163 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 TNFRSF10AO00220 468 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 TAF4O00268 1085 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 KMOO15229 486 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 SLC16A6O15403 523 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 CD3EAPO15446 510 aaKnown RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 LINC01565O15544 149 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 ACSL4O60488 711 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 TBL1XO60907 577 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 KATNA1O75449 491 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 RECQL5O94762 991 aaPredicted RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 RHOBTB1O94844 696 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 SERPINA1P01009 418 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 CHRNB1P11230 501 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 PRKCAP17252 672 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 C21orf33P30042 268 aaPredicted RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 RYKP34925 604 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 VIPR2P41587 438 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 ST13P50502 369 aaKnown RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 CRISP3P54108 245 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 MLLT1Q03111 559 aaPredicted RBP8.89□□□□□ -0.99
THBS3-211ENST00000541990 MESP2Q0VG99 397 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 E2F2Q14209 437 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 ZNF404Q494X3 552 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 BRMS1LQ5PSV4 323 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 LILRA6Q6PI73 481 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 GCNT7Q6ZNI0 430 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 LACC1Q8IV20 430 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 TCEAL8Q8IYN2 117 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 CMTM8Q8IZV2 173 aa8.89□□□□□ -0.99
THBS3-211ENST00000541990 EID3Q8N140 333 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms