RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 SUV39H2Q9H5I1 410 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 CCDC86Q9H6F5 360 aaKnown RBP6.17□□□□□ -1.42
DMD-228ENST00000541735 CHRAC1Q9NRG0 131 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 CD207Q9UJ71 328 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 ZNF180Q9UJW8 692 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 CPS1P31327 1500 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 KCNU1A8MYU2 1149 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 MID1O15344 667 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 B4GALT4O60513 344 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 RHOP08100 348 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SPARCP09486 303 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 KIR3DL1P43629 444 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 GABRA2P47869 451 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 LEPRP48357 1165 aaKnown RBP6.17□□□□□ -1.42
DMD-228ENST00000541735 SLC10A7Q0GE19 358 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SMARCB1Q12824 385 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SLC35G1Q2M3R5 365 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 MTX3Q5HYI7 312 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 ZER1Q7Z7L7 766 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SLC51AQ86UW1 340 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SNIP1Q8TAD8 396 aaKnown RBP6.17□□□□□ -1.42
DMD-228ENST00000541735 SLC38A4Q969I6 547 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 PLD4Q96BZ4 506 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 KLHL15Q96M94 604 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 AIFM2Q9BRQ8 373 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 ZNF471Q9BX82 626 aaPredicted RBP6.17□□□□□ -1.42
DMD-228ENST00000541735 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.17□□□□□ -1.42
DMD-228ENST00000541735 RARRES3Q9UL19 164 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 CASZ1Q86V15 1759 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 A0A1B0GV50 99 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SMIM30A4D0T7 59 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 A8MVJ9 347 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 PLSCR1O15162 318 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 NARSO43776 548 aaKnown RBP6.17□□□□□ -1.42
DMD-228ENST00000541735 UNC5CO95185 931 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 S100A6P06703 90 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 GRPRP30550 384 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 KCNQ1P51787 676 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 BICRALQ6AI39 1079 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 TMEFF1Q8IYR6 380 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 OR7A2PQ8NGA2 310 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SLC22A18Q96BI1 424 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 NXNL1Q96CM4 212 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SLC7A6OSQ96CW6 309 aaPredicted RBP6.17□□□□□ -1.42
DMD-228ENST00000541735 PIP5K1AQ99755 562 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SLC40A1Q9NP59 571 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 SNX15Q9NRS6 342 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 HPF1Q9NWY4 346 aa6.17□□□□□ -1.42
DMD-228ENST00000541735 PTRH2Q9Y3E5 179 aaKnown RBP6.17□□□□□ -1.42
DMD-228ENST00000541735 CLUHO75153 1309 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 LEFTY2O00292 366 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 RTCAO00442 366 aaKnown RBP6.16□□□□□ -1.42
DMD-228ENST00000541735 PPEF2O14830 753 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 RNGTTO60942 597 aaKnown RBP6.16□□□□□ -1.42
DMD-228ENST00000541735 OR4F21O95013 312 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 CLDN7O95471 211 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 GZMAP12544 262 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 GNB2P62879 340 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 LIPEQ05469 1076 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 SLC3A1Q07837 685 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 RRP1BQ14684 758 aaKnown RBP6.16□□□□□ -1.42
DMD-228ENST00000541735 TIGD6Q17RP2 521 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 SLC25A52Q3SY17 297 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 ARSKQ6UWY0 536 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 CDHR3Q6ZTQ4 885 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 ZNF554Q86TJ5 538 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 ZNF548Q8NEK5 533 aaPredicted RBP6.16□□□□□ -1.42
DMD-228ENST00000541735 TMEM41AQ96HV5 264 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 MRPL57Q9BQC6 102 aaKnown RBP6.16□□□□□ -1.42
DMD-228ENST00000541735 TIGARQ9NQ88 270 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 ZNF701Q9NV72 531 aaPredicted RBP6.16□□□□□ -1.42
DMD-228ENST00000541735 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.16□□□□□ -1.42
DMD-228ENST00000541735 USP31Q70CQ4 1352 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 TRIM64CA6NLI5 447 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 DLDP09622 509 aaKnown RBP6.16□□□□□ -1.42
DMD-228ENST00000541735 RGS19P49795 217 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 KHKP50053 298 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 CAMK2DQ13557 499 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 BRMS1LQ5PSV4 323 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 ATAD3CQ5T2N8 411 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 PRAMEF17Q5VTA0 474 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 PRAMEF13Q5VWM6 474 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 LYSMD4Q5XG99 296 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 KANK2Q63ZY3 851 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 KIAA0895LQ68EN5 471 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 ANKRD26P1Q6NSI1 321 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 TXNDC11Q6PKC3 985 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 SPPL2CQ8IUH8 684 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 DAGLBQ8NCG7 672 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 OR2L2Q8NH16 312 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 PHB2Q99623 299 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 MGME1Q9BQP7 344 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 PDZD7Q9H5P4 517 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 PRTFDC1Q9NRG1 225 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 SMOXQ9NWM0 555 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 FBXO9Q9UK97 447 aaPredicted RBP6.16□□□□□ -1.42
DMD-228ENST00000541735 OR1A2Q9Y585 309 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 UBOX5O94941 541 aa6.16□□□□□ -1.42
DMD-228ENST00000541735 KAT7O95251 611 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms