RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 RAD51AP1Q96B01 352 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 ANKRD27Q96NW4 1050 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 KLQ9UEF7 1012 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 SLC7A8Q9UHI5 535 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 TAGLN3Q9UI15 199 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 CFAP20Q9Y6A4 193 aaKnown RBP8.42□□□□□ -1.06
THBS3-210ENST00000541576 A0A1W2PPC4 97 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 TNFRSF10CO14798 259 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 COQ9O75208 318 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 NDUFS2O75306 463 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 CLDN9O95484 217 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 HTR6P50406 440 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 GRB7Q14451 532 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 RD3Q7Z3Z2 195 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 THOC6Q86W42 341 aaKnown RBP8.42□□□□□ -1.06
THBS3-210ENST00000541576 ARHGAP24Q8N264 748 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 CHCHD4Q8N4Q1 142 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 OR13H1Q8NG92 308 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 OR56A3Q8NH54 315 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 OR5K2Q8NHB8 316 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 TSACCQ96A04 125 aaPredicted RBP8.42□□□□□ -1.06
THBS3-210ENST00000541576 PRPF18Q99633 342 aaKnown RBP8.42□□□□□ -1.06
THBS3-210ENST00000541576 CCT7Q99832 543 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 INTS7Q9NVH2 962 aaKnown RBP8.42□□□□□ -1.06
THBS3-210ENST00000541576 TRPS1Q9UHF7 1281 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 WDR37Q9Y2I8 494 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 RNF11Q9Y3C5 154 aa8.42□□□□□ -1.06
THBS3-210ENST00000541576 COPG1Q9Y678 874 aaKnown RBP8.42□□□□□ -1.06
THBS3-210ENST00000541576 PRR19A6NJB7 356 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 PDZK1P1A8MUH7 402 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 PRAMEF4O60810 478 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 CXCL12P48061 93 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 PRAMEF9Q5VWM5 478 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 UTS2BQ765I0 119 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 LMNTD1Q8N9Z9 388 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 TUBGCP3Q96CW5 907 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 C12orf66Q96MD2 445 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 TRIT1Q9H3H1 467 aaKnown RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 UBDO15205 165 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 CFLARO15519 480 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 VPS4BO75351 444 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 TCN1P20061 433 aaPredicted RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 PIK3R1P27986 724 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 SRP54P61011 504 aaKnown RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 PRKG2Q13237 762 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 LRP8Q14114 963 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 XKR7Q5GH72 579 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 CAPN13Q6MZZ7 669 aaPredicted RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 IL27RAQ6UWB1 636 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 KLHDC8AQ8IYD2 350 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 OR2T11Q8NH01 316 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 INSM2Q96T92 566 aaPredicted RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 HBEGFQ99075 208 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 CD320Q9NPF0 282 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 POLG2Q9UHN1 485 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 BLOC1S6Q9UL45 172 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 INVSQ9Y283 1065 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 CACNA1IQ9P0X4 2223 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 FFAR3O14843 346 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 GPR42O15529 346 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 HNRNPCL1O60812 293 aaKnown RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 ALDOCP09972 364 aaKnown RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 HALP42357 657 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 PNLIPRP1P54315 467 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 TBPL1P62380 186 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 TSTA3Q13630 321 aaPredicted RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 PTK2BQ14289 1009 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 PDK3Q15120 406 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 ALG11Q2TAA5 492 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 UAP1L1Q3KQV9 507 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 DUS1LQ6P1R4 473 aaKnown RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 Q6ZSR9 355 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 HID1Q8IV36 788 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 TBC1D21Q8IYX1 336 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 HMGCLL1Q8TB92 370 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 DTNBP1Q96EV8 351 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 DCUN1D5Q9BTE7 237 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 SLC29A3Q9BZD2 475 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 FAM192AQ9GZU8 254 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 IMP3Q9NV31 184 aaKnown RBP8.41□□□□□ -1.06
THBS3-210ENST00000541576 RIC8BQ9NVN3 520 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 PLAGL1Q9UM63 463 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 BDP1A6H8Y1 2624 aa8.41□□□□□ -1.06
THBS3-210ENST00000541576 ZDBF2Q9HCK1 2354 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 ABCA7Q8IZY2 2146 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 E7ENX8 843 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 ULK1O75385 1050 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 RASGRP1O95267 797 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 THEGLP0DJG4 465 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 MAPK10P53779 464 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 ZXDAP98168 799 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 CTBSQ01459 385 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 IRF8Q02556 426 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 TAP2Q03519 686 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 CHIT1Q13231 466 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 LSAMPQ13449 338 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 ABRAXAS2Q15018 415 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 TCEA2Q15560 299 aa8.4□□□□□ -1.06
THBS3-210ENST00000541576 CPSF6Q16630 551 aaKnown RBP eCLIP8.4□□□□□ -1.06
THBS3-210ENST00000541576 GGTA1PQ4G0N0 100 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms