RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 NAE1Q13564 534 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 TSTA3Q13630 321 aaPredicted RBP18.06■□□□□ 0.48
VPS33A-205ENST00000541169 SUSD1Q6UWL2 747 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 C17orf64Q86WR6 236 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 GPR135Q8IZ08 494 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 SPATA6LQ8N4H0 392 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 TBC1D19Q8N5T2 526 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 KCTD4Q8WVF5 259 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 PTERQ96BW5 349 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 PKNOX2Q96KN3 472 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 NRTNQ99748 197 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 MRPL57Q9BQC6 102 aaKnown RBP18.06■□□□□ 0.48
VPS33A-205ENST00000541169 ATG10Q9H0Y0 220 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 ALG9Q9H6U8 611 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 ENAMQ9NRM1 1142 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 TMEM184CQ9NVA4 438 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 DCDC2Q9UHG0 476 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 IKZF3Q9UKT9 509 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 KCNE2Q9Y6J6 123 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 AP1M2Q9Y6Q5 423 aa18.06■□□□□ 0.48
VPS33A-205ENST00000541169 KIF26BQ2KJY2 2108 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 RFPL1O75677 317 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 HBQ1P09105 142 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 EBLN1P0CF75 366 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 EZRP15311 586 aaKnown RBP18.05■□□□□ 0.48
VPS33A-205ENST00000541169 FOLR1P15328 257 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 GRK3P35626 688 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 DLG1Q12959 904 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 OR4D1Q15615 310 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 TCTE1Q5JU00 501 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 KIAA1614Q5VZ46 1190 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 DNAJC22Q8N4W6 341 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 PPFIBP2Q8ND30 876 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 SNIP1Q8TAD8 396 aaKnown RBP18.05■□□□□ 0.48
VPS33A-205ENST00000541169 THAP11Q96EK4 314 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 ATOH8Q96SQ7 321 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 PLCD4Q9BRC7 762 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 DPH7Q9BTV6 452 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 GPRC5BQ9NZH0 403 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 TBK1Q9UHD2 729 aa18.05■□□□□ 0.48
VPS33A-205ENST00000541169 PTBP2Q9UKA9 531 aaKnown RBP18.05■□□□□ 0.48
VPS33A-205ENST00000541169 TNPO3Q9Y5L0 923 aaKnown RBP18.05■□□□□ 0.48
VPS33A-205ENST00000541169 OR2A25A4D2G3 310 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 KRT87PA6NCN2 255 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 C9orf172C9J069 976 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 STMND1H3BQB6 276 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 TXNDC9O14530 226 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 CTIFO43310 598 aaKnown RBP18.04■□□□□ 0.48
VPS33A-205ENST00000541169 PVRP15151 417 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 NPPBP16860 134 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 ETV5P41161 510 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 CCT5P48643 541 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 ALDH18A1P54886 795 aaKnown RBP18.04■□□□□ 0.48
VPS33A-205ENST00000541169 ITGA1P56199 1179 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 SH3BP2P78314 561 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 MAP7Q14244 749 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 PTCHD3Q3KNS1 767 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 YOD1Q5VVQ6 348 aaPredicted RBP18.04■□□□□ 0.48
VPS33A-205ENST00000541169 TLDC1Q6P9B6 456 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 MBOAT1Q6ZNC8 495 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 CDHR3Q6ZTQ4 885 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 TRIM73Q86UV7 250 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 KDF1Q8NAX2 398 aaPredicted RBP18.04■□□□□ 0.48
VPS33A-205ENST00000541169 ZNF248Q8NDW4 579 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 ABHD11Q8NFV4 315 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 ZNF501Q96CX3 271 aaPredicted RBP18.04■□□□□ 0.48
VPS33A-205ENST00000541169 PPM1MQ96MI6 270 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 GPR78Q96P69 363 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 ACAT2Q9BWD1 397 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 DPH1Q9BZG8 443 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 FAM117AQ9C073 453 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 MRPL46Q9H2W6 279 aaKnown RBP18.04■□□□□ 0.48
VPS33A-205ENST00000541169 ARGLU1Q9NWB6 273 aaPredicted RBP18.04■□□□□ 0.48
VPS33A-205ENST00000541169 EURLQ9NYK6 297 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 WWOXQ9NZC7 414 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 LGALS13Q9UHV8 139 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 DYRK1BQ9Y463 629 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 PCDHB3Q9Y5E6 796 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 B3GALT1Q9Y5Z6 326 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 SPEGQ15772 3267 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 ADAMTS20P59510 1910 aa18.04■□□□□ 0.48
VPS33A-205ENST00000541169 RRP8O43159 456 aaKnown RBP18.03■□□□□ 0.48
VPS33A-205ENST00000541169 PRAMEF10O60809 474 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 STK16O75716 305 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 GNAZP19086 355 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 PSMB5P28074 263 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 SLCO1A2P46721 670 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 SLC6A12P48065 614 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 IRF9Q00978 393 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 ZNF425Q6IV72 752 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 THOC6Q86W42 341 aaKnown RBP18.03■□□□□ 0.48
VPS33A-205ENST00000541169 EPS8L3Q8TE67 593 aaKnown RBP18.03■□□□□ 0.48
VPS33A-205ENST00000541169 MZB1Q8WU39 189 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 UBTD2Q8WUN7 234 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 ZFYVE21Q9BQ24 234 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 PITHD1Q9GZP4 211 aaPredicted RBP18.03■□□□□ 0.48
VPS33A-205ENST00000541169 RRAGDQ9NQL2 400 aaPredicted RBP18.03■□□□□ 0.48
VPS33A-205ENST00000541169 SENP1Q9P0U3 644 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 SRPK3Q9UPE1 567 aa18.03■□□□□ 0.48
VPS33A-205ENST00000541169 PLAAQ9Y263 795 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms